RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 STILQ15468 1287 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 PTPROQ16827 1216 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 DUSP6Q16828 381 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 TMTC1Q8IUR5 882 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 FMNL3Q8IVF7 1028 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 NDRG1Q92597 394 aaKnown RBP12.74□□□□□ -0.37
CLK4-215ENST00000611733 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLK4-215ENST00000611733 CPXM1Q96SM3 734 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 DNAI2Q9GZS0 605 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 NENFQ9UMX5 172 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 TFR2Q9UP52 801 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 HCFC2Q9Y5Z7 792 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 REV3LO60673 3130 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 AKR1B10O60218 316 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 GLUD1P00367 558 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 CDH5P33151 784 aaPredicted RBP12.74□□□□□ -0.37
CLK4-215ENST00000611733 BCAT1P54687 386 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 TCEAL8Q8IYN2 117 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 SCAMP5Q8TAC9 235 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 SLC7A14Q8TBB6 771 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 DEF6Q9H4E7 631 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 ABCB6Q9NP58 842 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 NAGPAQ9UK23 515 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 FBXW11Q9UKB1 542 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 PLXNA3P51805 1871 aa12.74□□□□□ -0.37
CLK4-215ENST00000611733 PRRG1O14668 218 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 RFPL2O75678 378 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 ELF1P32519 619 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 MAGEA11P43364 429 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 USP46P62068 366 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 SMARCB1Q12824 385 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 KCNC3Q14003 757 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 SLC18A3Q16572 532 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 PTPN20Q4JDL3 420 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 CCDC122Q5T0U0 273 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 TMEM35BQ8NCS4 154 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 C2orf15Q8WU43 125 aaKnown RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 DESI2Q9BSY9 194 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 PACSIN1Q9BY11 444 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 DMAP1Q9NPF5 467 aaPredicted RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 MAN1C1Q9NR34 630 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 ST7Q9NRC1 585 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 CHORDC1Q9UHD1 332 aaPredicted RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 REXO2Q9Y3B8 237 aaKnown RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 YIPF1Q9Y548 306 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 EPN1Q9Y6I3 576 aaPredicted RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 A0A0U1RQJ8 604 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 TNFRSF10BO14763 440 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 XPO1O14980 1071 aaKnown RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 C8AP07357 584 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 LCP1P13796 627 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 TWF1Q12792 350 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 PTP4A2Q12974 167 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 PDCLQ13371 301 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 CYP4A22Q5TCH4 519 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 ACAD10Q6JQN1 1059 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 ALKBH5Q6P6C2 394 aaKnown RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 VSTM1Q6UX27 236 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 TOGARAM2Q6ZUX3 1019 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 C12orf76Q8N812 135 aaPredicted RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 ACRBPQ8NEB7 543 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 CLEC4CQ8WTT0 213 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 ATRIPQ8WXE1 791 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 C8orf48Q96LL4 319 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 NSUN3Q9H649 340 aaKnown RBP12.73□□□□□ -0.37
CLK4-215ENST00000611733 INSL5Q9Y5Q6 135 aa12.73□□□□□ -0.37
CLK4-215ENST00000611733 E5RJQ4 531 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 NDUFA10O95299 355 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 GLP2RO95838 553 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 ERBB2P04626 1255 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 SETSIPP0DME0 302 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 PLA2G4AP47712 749 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 TUFMP49411 452 aaKnown RBP12.72□□□□□ -0.37
CLK4-215ENST00000611733 PGFP49763 221 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 CENPCQ03188 943 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 IFRD2Q12894 506 aaPredicted RBP12.72□□□□□ -0.37
CLK4-215ENST00000611733 MMS22LQ6ZRQ5 1243 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 SCUBE3Q8IX30 993 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 MICALL1Q8N3F8 863 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 MYLIPQ8WY64 445 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 PPP1R13BQ96KQ4 1090 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 C11orf70Q9BRQ4 267 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 ATP8B3O60423 1300 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 PTPRDP23468 1912 aa12.72□□□□□ -0.37
CLK4-215ENST00000611733 LSM8O95777 96 aaKnown RBP12.71□□□□□ -0.37
CLK4-215ENST00000611733 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 ERICH1Q86X53 443 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 CCDC170Q8IYT3 715 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 PIWIL1Q96J94 861 aaKnown RBP12.71□□□□□ -0.37
CLK4-215ENST00000611733 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
CLK4-215ENST00000611733 MIS12Q9H081 205 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 ISCUQ9H1K1 167 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 PRRC2BQ5JSZ5 2229 aaKnown RBP12.71□□□□□ -0.37
CLK4-215ENST00000611733 RCCD1A6NED2 376 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 CCL16O15467 120 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
CLK4-215ENST00000611733 RTN2O75298 545 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 GJB6O95452 261 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms