RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 VNN1O95497 513 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 TYK2P29597 1187 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 GARSP41250 739 aaKnown RBP6.65□□□□□ -1.34
SNX13-213ENST00000611725 ARL13BQ3SXY8 428 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 GJC2Q5T442 439 aaPredicted RBP6.65□□□□□ -1.34
SNX13-213ENST00000611725 DSTYKQ6XUX3 929 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 NLRP9Q7RTR0 991 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 APPL2Q8NEU8 664 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 STOML1Q9UBI4 398 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 SNCAIPQ9Y6H5 919 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 RRN3P2A6NIE6 340 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 GYG2O15488 501 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 CREB1P16220 341 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 SAT1P21673 171 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 TAF6P49848 677 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 OVGP1Q12889 678 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 GOLGA7BQ2TAP0 167 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 ARID3BQ8IVW6 561 aaPredicted RBP6.65□□□□□ -1.34
SNX13-213ENST00000611725 KIAA0319LQ8IZA0 1049 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 AGGF1Q8N302 714 aaeCLIP6.65□□□□□ -1.34
SNX13-213ENST00000611725 DDX1Q92499 740 aaKnown RBP6.65□□□□□ -1.34
SNX13-213ENST00000611725 CLMNQ96JQ2 1002 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 FAM111AQ96PZ2 611 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 SLC13A1Q9BZW2 595 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 NOD2Q9HC29 1040 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 ZNF112Q9UJU3 913 aa6.65□□□□□ -1.34
SNX13-213ENST00000611725 SOWAHBA6NEL2 793 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 CREB3O43889 395 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 MUM1Q2TAK8 710 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 NOTUMQ6P988 496 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 MOB2Q70IA6 237 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 CRLF3Q8IUI8 442 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 ALLCQ8N6M5 410 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 C1orf127Q8N9H9 656 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 FBXO41Q8TF61 875 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 CD101Q93033 1021 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 CPXM1Q96SM3 734 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 TSSK1BQ9BXA7 367 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 WWP1Q9H0M0 922 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 VPS11Q9H270 941 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 KDM4CQ9H3R0 1056 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 SMYD3Q9H7B4 428 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 AFG3L2Q9Y4W6 797 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 H3BRJ5 948 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 STRNO43815 780 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 NPTXRO95502 500 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 CETPP11597 493 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 ETS1P14921 441 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 SP2Q02086 613 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 ACAP1Q15027 740 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 KIF9Q9HAQ2 790 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 TLK1Q9UKI8 766 aa6.65□□□□□ -1.35
SNX13-213ENST00000611725 SIPA1L3O60292 1781 aaPredicted RBP6.65□□□□□ -1.35
SNX13-213ENST00000611725 FZD9O00144 591 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 CCDC22O60826 627 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 CD4P01730 458 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 LCP1P13796 627 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 MX2P20592 715 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 GNL1P36915 607 aaPredicted RBP6.64□□□□□ -1.35
SNX13-213ENST00000611725 ZNF143P52747 638 aaPredicted RBP6.64□□□□□ -1.35
SNX13-213ENST00000611725 QPCTQ16769 361 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 FBXO47Q5MNV8 452 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 C6orf89Q6UWU4 347 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 ZDHHC14Q8IZN3 488 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.64□□□□□ -1.35
SNX13-213ENST00000611725 OR6J1Q8NGC5 347 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 STAMBPL1Q96FJ0 436 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 FZD8Q9H461 694 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 ABCF3Q9NUQ8 709 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 SETD4Q9NVD3 440 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 ITGA11Q9UKX5 1188 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 MROH7Q68CQ1 1323 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 ZNF541Q9H0D2 1346 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 ASPHQ12797 758 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 DGKDQ16760 1214 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 EFHC1Q5JVL4 640 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 TRIM68Q6AZZ1 485 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 CNPY4Q8N129 248 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 CDCA5Q96FF9 252 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 NUDCD1Q96RS6 583 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 OSMRQ99650 979 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 NPHS2Q9NP85 383 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 C2CD2Q9Y426 696 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 F5H423 210 aaPredicted RBP6.64□□□□□ -1.35
SNX13-213ENST00000611725 STAMBPO95630 424 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 ARF4P18085 180 aaPredicted RBP6.64□□□□□ -1.35
SNX13-213ENST00000611725 PSMC4P43686 418 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 SMAD1Q15797 465 aaKnown RBP6.64□□□□□ -1.35
SNX13-213ENST00000611725 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 TAS1R3Q7RTX0 852 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 NT5DC4Q86YG4 428 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 DEPDC1BQ8WUY9 529 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 PARK7Q99497 189 aaKnown RBP6.64□□□□□ -1.35
SNX13-213ENST00000611725 VTA1Q9NP79 307 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 PDGFCQ9NRA1 345 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 AKAP11Q9UKA4 1901 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 CACNA1SQ13698 1873 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 KBTBD13C9JR72 458 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 GRIN3BO60391 1043 aa6.64□□□□□ -1.35
SNX13-213ENST00000611725 PIAS1O75925 651 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms