RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 LYNP07948 512 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 CXCL8P10145 99 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 CREB1P16220 341 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 TNFAIP3P21580 790 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 RGS2P41220 211 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 PHEXP78562 749 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 KBTBD2Q8IY47 623 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 KIAA0319LQ8IZA0 1049 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 TMEM174Q8WUU8 243 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 EMID1Q96A84 441 aaPredicted RBP16.75■□□□□ 0.27
RTN1-209ENST00000611068 TUBGCP5Q96RT8 1024 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 ARHGEF38Q9NXL2 777 aa16.75■□□□□ 0.27
RTN1-209ENST00000611068 C6orf222P0C671 652 aaPredicted RBP16.74■□□□□ 0.27
RTN1-209ENST00000611068 SMIM10L2AP0DMW4 78 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 SMIM10L2BP0DMW5 78 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 OXCT1P55809 520 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 CCDC6Q16204 474 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 RFWD3Q6PCD5 774 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 TRPV1Q8NER1 839 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 AGAP3Q96P47 875 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 STOML1Q9UBI4 398 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 SH3GLB1Q9Y371 365 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 MKI67P46013 3256 aaKnown RBP16.74■□□□□ 0.27
RTN1-209ENST00000611068 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 CNTNAP2Q9UHC6 1331 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 ACKR2O00590 384 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 C4BPAP04003 597 aaKnown RBP16.74■□□□□ 0.27
RTN1-209ENST00000611068 FLT3LGP49771 235 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 NEK3P51956 506 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 HPCAP84074 193 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 SREBF2Q12772 1141 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 C2CD6Q53TS8 623 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 NOP9Q86U38 636 aaKnown RBP16.74■□□□□ 0.27
RTN1-209ENST00000611068 AGGF1Q8N302 714 aaeCLIP16.74■□□□□ 0.27
RTN1-209ENST00000611068 OLIG1Q8TAK6 271 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 USP6NLQ92738 828 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 FZD8Q9H461 694 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 APOBEC3GQ9HC16 384 aaKnown RBP16.74■□□□□ 0.27
RTN1-209ENST00000611068 TXLNGQ9NUQ3 528 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 CIDEBQ9UHD4 219 aa16.74■□□□□ 0.27
RTN1-209ENST00000611068 TRIM43BA6NCK2 446 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 ATMINO43313 823 aaPredicted RBP16.73■□□□□ 0.27
RTN1-209ENST00000611068 FAM189A1O60320 539 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 PIGRP01833 764 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 PRKCIP41743 596 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 GALCP54803 685 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 OCRLQ01968 901 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 PRKCZQ05513 592 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 RCN1Q15293 331 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 NAB2Q15742 525 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 USP37Q86T82 979 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 ZNF554Q86TJ5 538 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 GDAP1Q8TB36 358 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 DNAJB3Q8WWF6 145 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 LZICQ8WZA0 190 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 FMO2Q99518 471 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 CXCL16Q9H2A7 254 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 DCLRE1BQ9H816 532 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 OSGEPQ9NPF4 335 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 KAT6AQ92794 2004 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 FOXO6A8MYZ6 492 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 TREHO43280 583 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 ELNP15502 786 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 ARF4P18085 180 aaPredicted RBP16.73■□□□□ 0.27
RTN1-209ENST00000611068 GPC3P51654 580 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 MFAP3P55082 362 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 TMED1Q13445 227 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 SLC29A2Q14542 456 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 ZNF394Q53GI3 561 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 WASHC2DQ5SRD0 308 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 ZPBP2Q6X784 338 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 SCARA5Q6ZMJ2 495 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 VPS36Q86VN1 386 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 RIBC1Q8N443 379 aaPredicted RBP16.73■□□□□ 0.27
RTN1-209ENST00000611068 ZNF653Q96CK0 615 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 SLC7A6OSQ96CW6 309 aaPredicted RBP16.73■□□□□ 0.27
RTN1-209ENST00000611068 ERP27Q96DN0 273 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 PCDHB18PQ96TA0 734 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 OSMRQ99650 979 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 CDT1Q9H211 546 aa16.73■□□□□ 0.27
RTN1-209ENST00000611068 BOLA2-SMG1P6H3BVE0 249 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 P4HA2O15460 535 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 CA12O43570 354 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 GAS2O43903 313 aaKnown RBP16.72■□□□□ 0.27
RTN1-209ENST00000611068 KRT19P08727 400 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 NUDT17P0C025 328 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 PHKA2P46019 1235 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 WDR72Q3MJ13 1102 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 ZACNQ401N2 412 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 CCDC92Q53HC0 331 aaPredicted RBP16.72■□□□□ 0.27
RTN1-209ENST00000611068 ZNF449Q6P9G9 518 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 MPZL3Q6UWV2 235 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 SPATA24Q86W54 205 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 VSIG1Q86XK7 387 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 SCUBE1Q8IWY4 988 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 SLC30A5Q8TAD4 765 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 TRIB2Q92519 343 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 APBA2Q99767 749 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 AGPAT1Q99943 283 aa16.72■□□□□ 0.27
RTN1-209ENST00000611068 AP5M1Q9H0R1 490 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms