RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 LRCH4O75427 683 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 APRTP07741 180 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 GARTP22102 1010 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 SFNP31947 248 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 HMGCS2P54868 508 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 CCDC15Q0P6D6 951 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 CTC1Q2NKJ3 1217 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 C15orf59Q2T9L4 293 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 C15orf39Q6ZRI6 1047 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 RIBC1Q8N443 379 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 SAMD3Q8N6K7 520 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 C2CD2LO14523 706 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 ABHD2P08910 425 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 RASA2Q15283 850 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 SLC45A4Q5BKX6 768 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 PHF13Q86YI8 300 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 MCPH1Q8NEM0 835 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 AGR3Q8TD06 166 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 PGLYRP2Q96PD5 576 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 DCLRE1BQ9H816 532 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 CYP4F11Q9HBI6 524 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 PCMTD2Q9NV79 361 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 AHDC1Q5TGY3 1603 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 GREB1LQ9C091 1923 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 SORBS2O94875 1100 aaKnown RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 SARNPP82979 210 aaKnown RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 CDCA2Q69YH5 1023 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.34■■□□□ 1.012e-6■■■□□ 18.9
SSBP3-216ENST00000610401 ZNF677Q86XU0 584 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 SLC7A3Q8WY07 619 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 INPP5DQ92835 1189 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 ARHGAP28Q9P2N2 729 aa21.34■■□□□ 1.01
SSBP3-216ENST00000610401 PPP1R1BQ9UD71 204 aaPredicted RBP21.34■■□□□ 1.01
SSBP3-216ENST00000610401 ARHGAP42A6NI28 874 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 CRADDP78560 199 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 CNTN2Q02246 1040 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 C1QBPQ07021 282 aaKnown RBP21.33■■□□□ 1.01
SSBP3-216ENST00000610401 UBAP2LQ14157 1087 aaKnown RBP21.33■■□□□ 1.01
SSBP3-216ENST00000610401 KRT27Q7Z3Y8 459 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 UNC5BQ8IZJ1 945 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 DCAKDQ8WVC6 231 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 PCDH9Q9HC56 1237 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 HMGXB4Q9UGU5 601 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 C2CD2Q9Y426 696 aa21.33■■□□□ 1.01
SSBP3-216ENST00000610401 WNT10BO00744 389 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 COPEO14579 308 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 ZWINTO95229 277 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 KCNA3P22001 575 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 CCND2P30279 289 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 RGS7P49802 495 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 CDH6P55285 790 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 PPP6R3Q5H9R7 873 aaPredicted RBP21.33■■□□□ 1
SSBP3-216ENST00000610401 EFHC2Q5JST6 749 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 C16orf46Q6P387 395 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 MAGEB5Q9BZ81 275 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 STOML1Q9UBI4 398 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 LRRC42Q9Y546 428 aa21.33■■□□□ 1
SSBP3-216ENST00000610401 MAGEB2O15479 319 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 LYPLA2O95372 231 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 EPHB1P54762 984 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 CHI3L2Q15782 390 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 TREML1Q86YW5 311 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 KBTBD2Q8IY47 623 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 BANPQ8N9N5 519 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 TRAPPC12Q8WVT3 735 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 PPP1R36Q96LQ0 422 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 CPXM1Q96SM3 734 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 MRIQ9BWK5 157 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.32■■□□□ 1
SSBP3-216ENST00000610401 LRRC74BQ6ZQY2 392 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 PPP1R14CQ8TAE6 165 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 NLRP4Q96MN2 994 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 TOM1L1O75674 476 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 ZNF200P98182 395 aaPredicted RBP21.32■■□□□ 1
SSBP3-216ENST00000610401 GRIK3Q13003 919 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 ZNF699Q32M78 642 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 VSIG10LQ86VR7 867 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 TMEM192Q8IY95 271 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.32■■□□□ 12e-6■■■■■ 40.9
SSBP3-216ENST00000610401 PIWIL1Q96J94 861 aaKnown RBP21.32■■□□□ 1
SSBP3-216ENST00000610401 SRPK1Q96SB4 655 aaKnown RBP21.32■■□□□ 1
SSBP3-216ENST00000610401 NTPCRQ9BSD7 190 aaKnown RBP21.32■■□□□ 1
SSBP3-216ENST00000610401 KCNK13Q9HB14 408 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 SHOC2Q9UQ13 582 aa21.32■■□□□ 1
SSBP3-216ENST00000610401 KCNN4O15554 427 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 KCNA2P16389 499 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 AQP5P55064 265 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 RSPH3Q86UC2 560 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.31■■□□□ 1
SSBP3-216ENST00000610401 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.31■■□□□ 1
SSBP3-216ENST00000610401 ATXN7L3BQ96GX2 97 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 EBF4Q9BQW3 602 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 C10orf71Q711Q0 1435 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 MCF2LO15068 1137 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 PMM2O15305 246 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 STK10O94804 968 aaKnown RBP21.31■■□□□ 1
SSBP3-216ENST00000610401 MIPP30301 263 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 SERPINB4P48594 390 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 EML3Q32P44 896 aa21.31■■□□□ 1
SSBP3-216ENST00000610401 SPDYE2Q495Y8 402 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms