RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ZXDBP98169 803 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 LMNB2Q03252 620 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 SPEM2Q0P670 501 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 STK4Q13043 487 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 TRPC3Q13507 836 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 EML3Q32P44 896 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 MDH1BQ5I0G3 518 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 DENND5BQ6ZUT9 1274 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 GRAMD1CQ8IYS0 662 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 CEP57L1Q8IYX8 460 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 CPA6Q8N4T0 437 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 SPRYD3Q8NCJ5 442 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 PLEKHO2Q8TD55 490 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 SH3RF2Q8TEC5 729 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 ATP2A3Q93084 1043 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 SYAP1Q96A49 352 aaPredicted RBP8.13□□□□□ -1.11
CUX1-219ENST00000606749 PAGE5Q96GU1 130 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 C8orf48Q96LL4 319 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 P2RY13Q9BPV8 354 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 TTLL2Q9BWV7 592 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 RNF38Q9H0F5 515 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 XYLT2Q9H1B5 865 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 DPEP3Q9H4B8 488 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 DMAC2Q9NW81 257 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 NXF1Q9UBU9 619 aaKnown RBP8.13□□□□□ -1.11
CUX1-219ENST00000606749 SERTAD1Q9UHV2 236 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 USP18Q9UMW8 372 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 ARHGAP26Q9UNA1 814 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 WNT6Q9Y6F9 365 aa8.13□□□□□ -1.11
CUX1-219ENST00000606749 ZNF638Q14966 1978 aaKnown RBP8.13□□□□□ -1.11
CUX1-219ENST00000606749 KIF26AQ9ULI4 1882 aaPredicted RBP8.13□□□□□ -1.11
CUX1-219ENST00000606749 CCDC163A0A0D9SF12 145 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 ZNF840PA6NDX5 716 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 A8MXQ7 604 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 CLDN5O00501 218 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 LRP3O75074 770 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 PHACTR2O75167 634 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 C4BPAP04003 597 aaKnown RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 DRD1P21728 446 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 CMA1P23946 247 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 ANXA13P27216 316 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 PPP3CCP48454 512 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 IFNAR2P48551 515 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 PXNP49023 591 aaPredicted RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 CASP4P49662 377 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 PDE6CP51160 858 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 CACNA2D1P54289 1103 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 CDH8P55286 799 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 SLC7A9P82251 487 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 TAF10Q12962 218 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 USP4Q13107 963 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 NR1H3Q13133 447 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 PSMD2Q13200 908 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 KCNB1Q14721 858 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 KMT5BQ4FZB7 885 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 FBXO43Q4G163 708 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 TDRD10Q5VZ19 366 aaKnown RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 NAIF1Q69YI7 327 aaPredicted RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 SLC9A9Q8IVB4 645 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 ADGRG2Q8IZP9 1017 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 FAM160A2Q8N612 972 aaPredicted RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 B3GALNT2Q8NCR0 500 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 KIAA0895Q8NCT3 520 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 TTC16Q8NEE8 873 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 GOLGA5Q8TBA6 731 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 PARD3BQ8TEW8 1205 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 TMEM174Q8WUU8 243 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 EXOC4Q96A65 974 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 B3GNT5Q9BYG0 378 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 ZNF518BQ9C0D4 1074 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 TMEM30AQ9NV96 361 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 POLR3BQ9NW08 1133 aaPredicted RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 EHD2Q9NZN4 543 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 TRPM5Q9NZQ8 1165 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 SLC8A2Q9UPR5 921 aa8.12□□□□□ -1.11
CUX1-219ENST00000606749 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.12□□□□□ -1.11
CUX1-219ENST00000606749 GREB1Q4ZG55 1949 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 ANAPC1Q9H1A4 1944 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 OBSL1O75147 1896 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 ATG2BQ96BY7 2078 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 A0A1B0GVL5 298 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 LRRIQ3A6PVS8 624 aaPredicted RBP8.11□□□□□ -1.11
CUX1-219ENST00000606749 LEFTY2O00292 366 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 RNF40O75150 1001 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 VNN1O95497 513 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 OLFM2O95897 454 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 ABL1P00519 1130 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 OAS1P00973 400 aaKnown RBP8.11□□□□□ -1.11
CUX1-219ENST00000606749 AP3M2P53677 418 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 DLG4P78352 724 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 NCOA4Q13772 614 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 CSRP2Q16527 193 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 PAQR9Q6ZVX9 377 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 CEP68Q76N32 757 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.11□□□□□ -1.11
CUX1-219ENST00000606749 NUP93Q8N1F7 819 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 CAMKK1Q8N5S9 505 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms