RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 GOLGA6L6A8MZA4 724 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 HHLA1C9JL84 531 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 PIK3R2O00459 728 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 DDX3XO00571 662 aaKnown RBP eCLIP8.12□□□□□ -1.117e-19■■■■■ 42.4
MSH6-211ENST00000606499 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 FOSL2P15408 326 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 FECHP22830 423 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 ELF1P32519 619 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 EIF4A3P38919 411 aaKnown RBP8.12□□□□□ -1.11
MSH6-211ENST00000606499 GRIK1P39086 918 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 GPD2P43304 727 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 RGS7P49802 495 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 GSDMDP57764 484 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 TWF1Q12792 350 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 MTMR3Q13615 1198 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 TSR1Q2NL82 804 aaKnown RBP8.12□□□□□ -1.11
MSH6-211ENST00000606499 NAA35Q5VZE5 725 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 VSTM1Q6UX27 236 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 DNAAF5Q86Y56 855 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 TMEM139Q8IV31 216 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 WDTC1Q8N5D0 677 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 EFHBQ8N7U6 833 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 C12orf76Q8N812 135 aaPredicted RBP8.12□□□□□ -1.11
MSH6-211ENST00000606499 GIPC2Q8TF65 315 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 PCDHB18PQ96TA0 734 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 CDCA3Q99618 268 aaPredicted RBP8.12□□□□□ -1.11
MSH6-211ENST00000606499 MTMR10Q9NXD2 777 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 HSFX1Q9UBD0 423 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 TJP2Q9UDY2 1190 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 PRRC2BQ5JSZ5 2229 aaKnown RBP8.12□□□□□ -1.11
MSH6-211ENST00000606499 DENND4AQ7Z401 1863 aa8.12□□□□□ -1.11
MSH6-211ENST00000606499 MYO7AQ13402 2215 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 A0A087X0T9 212 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 SOWAHDA6NJG2 315 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 TMCO5BA8MYB1 307 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 TNFRSF10BO14763 440 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 XPO1O14980 1071 aaKnown RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 TRIM66O15016 1216 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CCL16O15467 120 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 TBX10O75333 385 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 ZMYND10O75800 440 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 GABBR2O75899 941 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 LSM8O95777 96 aaKnown RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 C1RP00736 705 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 LRG1P02750 347 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CYP1A1P04798 512 aaPredicted RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 FAM228BP0C875 321 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 TNFAIP3P21580 790 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 ANXA13P27216 316 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 PLA2G4AP47712 749 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 ALDH1A3P47895 512 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 TUFMP49411 452 aaKnown RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 SLC5A3P53794 718 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 SLC8A3P57103 927 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 USP46P62068 366 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 RPL10AP62906 217 aaKnown RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 IFRD2Q12894 506 aaPredicted RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 PDCLQ13371 301 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 MTF1Q14872 753 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CCDC85BQ15834 202 aaPredicted RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 CLEC16AQ2KHT3 1053 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 PTPN20Q4JDL3 420 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 C2CD6Q53TS8 623 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 PPM1LQ5SGD2 360 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 PMF1Q6P1K2 205 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 EP400NLQ6ZTU2 488 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CCDC149Q6ZUS6 474 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 PIGZQ86VD9 579 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 TMEM35BQ8NCS4 154 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 SCAMP5Q8TAC9 235 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 SLC30A5Q8TAD4 765 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 SLC35F5Q8WV83 523 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CPA5Q8WXQ8 436 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 C8orf48Q96LL4 319 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CPXM1Q96SM3 734 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 BAG1Q99933 345 aaPredicted RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.11□□□□□ -1.11
MSH6-211ENST00000606499 APOL5Q9BWW9 433 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 LHX5Q9H2C1 402 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 DEF6Q9H4E7 631 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 PLEKHA4Q9H4M7 779 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 NHEJ1Q9H9Q4 299 aaPredicted RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 ST7Q9NRC1 585 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 SPTLC3Q9NUV7 552 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 HCFC1R1Q9NWW0 138 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CLDND1Q9NY35 253 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 TAS2R14Q9NYV8 317 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 ADAMTS1Q9UHI8 967 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CDH22Q9UJ99 828 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 MAFFQ9ULX9 164 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 CEP83Q9Y592 693 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 BZW2Q9Y6E2 419 aaKnown RBP8.11□□□□□ -1.11
MSH6-211ENST00000606499 DENND4CQ5VZ89 1909 aa8.11□□□□□ -1.11
MSH6-211ENST00000606499 HELZP42694 1942 aaKnown RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 CCDC195A0A1B0GUA6 201 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 SSU72P8A0A1W2PR75 194 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 SLC38A8A6NNN8 435 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 E5RJQ4 531 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 AKR1B10O60218 316 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 ERBB2P04626 1255 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms