RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, human

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-233	ENST00000602421	SLC39A12	Q504Y0	691 aa		18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	ANKS3	Q6ZW76	656 aa		18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	KCTD13	Q8WZ19	329 aa		18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	SMO	Q99835	787 aa		18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	ZBED2	Q9BTP6	218 aa		18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	OXCT2	Q9BYC2	517 aa	Predicted RBP	18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	UBXN6	Q9BZV1	441 aa		18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	LRRC4	Q9HBW1	653 aa		18.89	■□□□□ 0.61
MACF1-233	ENST00000602421	KCNK3	O14649	394 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	PAPSS1	O43252	624 aa	Predicted RBP	18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	GABBR2	O75899	941 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	BEST1	O76090	585 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	SLU7	O95391	586 aa	Known RBP	18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	OR4Q2	P0C623	313 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	BDNF	P23560	247 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	CXCR5	P32302	372 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	MAN1A1	P33908	653 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	SLC6A3	Q01959	620 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	NFE2	Q16621	373 aa	Predicted RBP	18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	TAS1R1	Q7RTX1	841 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	SCUBE3	Q8IX30	993 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	SLC39A11	Q8N1S5	342 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	UBL4B	Q8N7F7	174 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	COLGALT1	Q8NBJ5	622 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	MNS1	Q8NEH6	495 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	JOSD2	Q8TAC2	188 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	HERVK_113	Q902F9	699 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	DPF3	Q92784	378 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	PBK	Q96KB5	322 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	B3GALT6	Q96L58	329 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	CARD6	Q9BX69	1037 aa		18.88	■□□□□ 0.61
MACF1-233	ENST00000602421	ALPK3	Q96L96	1907 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	ZNF185	O15231	689 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	GJB5	O95377	273 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	RFC1	P35251	1148 aa	Predicted RBP	18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	RNASE9	P60153	205 aa	Known RBP	18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	CKAP4	Q07065	602 aa	Known RBP	18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	PIGH	Q14442	188 aa	Predicted RBP	18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	USP41	Q3LFD5	358 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	RTP2	Q5QGT7	225 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	OLFML1	Q6UWY5	402 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	CEP112	Q8N8E3	955 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	COG1	Q8WTW3	980 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	TMEM169	Q96HH4	297 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	CAPZA3	Q96KX2	299 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	MTIF3	Q9H2K0	278 aa	Known RBP	18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	DMAP1	Q9NPF5	467 aa	Predicted RBP	18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	AAAS	Q9NRG9	546 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	SPG21	Q9NZD8	308 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	UST	Q9Y2C2	406 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	SLC4A7	Q9Y6M7	1214 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	COL4A6	Q14031	1691 aa		18.87	■□□□□ 0.61
MACF1-233	ENST00000602421	CCDC66	A2RUB6	948 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	CES2	O00748	559 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	DDX3Y	O15523	660 aa	Known RBP	18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	PSMA2	P25787	234 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	CTNNA2	P26232	953 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	SCNN1A	P37088	669 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	HTRA4	P83105	476 aa	Predicted RBP	18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	KIAA1841	Q6NSI8	718 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	CPNE8	Q86YQ8	564 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	SIX6OS1	Q8N1H7	587 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	FIBCD1	Q8N539	461 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	ZMIZ2	Q8NF64	920 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	FNIP1	Q8TF40	1166 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	KCNK16	Q96T55	309 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	RHOBTB2	Q9BYZ6	727 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	CSNK1G1	Q9HCP0	422 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	CXXC1	Q9P0U4	656 aa	Predicted RBP	18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	INSL6	Q9Y581	213 aa		18.86	■□□□□ 0.61
MACF1-233	ENST00000602421	FBXO21	O94952	628 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	EFEMP2	O95967	443 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	PAFAH1B1	P43034	410 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	SSR1	P43307	286 aa	Known RBP	18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	CACNA2D1	P54289	1103 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	ARPP19	P56211	112 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	OGDH	Q02218	1023 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	ADIG	Q0VDE8	80 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	CCDC181	Q5TID7	509 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	EMC1	Q8N766	993 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	NIPA2	Q8N8Q9	360 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	PHOSPHO2	Q8TCD6	241 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	RIN2	Q8WYP3	895 aa	Predicted RBP	18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	CD101	Q93033	1021 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	ABHD8	Q96I13	439 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	FUBP3	Q96I24	572 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	SLC9A7	Q96T83	725 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	ABI2	Q9NYB9	513 aa	Predicted RBP	18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	RNF14	Q9UBS8	474 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	TMEM59L	Q9UK28	342 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	PCDHB5	Q9Y5E4	795 aa		18.85	■□□□□ 0.61
MACF1-233	ENST00000602421	TBC1D4	O60343	1298 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	SOD2	P04179	222 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	CPB1	P15086	417 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	GPD1	P21695	349 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	CTNNA1	P35221	906 aa	Known RBP	18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	PPM1A	P35813	382 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	GRIK1	P39086	918 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	TKTL1	P51854	596 aa		18.84	■□□□□ 0.61
MACF1-233	ENST00000602421	ZNF252P-AS1	Q0IIN9	211 aa		18.84	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms