RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 MCRS1Q96EZ8 462 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 RNPC3Q96LT9 517 aaKnown RBP23.79■■□□□ 1.4
IRF3-228ENST00000601291 SMOQ99835 787 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 UBXN6Q9BZV1 441 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 CSNK1G1Q9HCP0 422 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 DMAP1Q9NPF5 467 aaPredicted RBP23.79■■□□□ 1.4
IRF3-228ENST00000601291 MTRRQ9UBK8 725 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 PCDHB5Q9Y5E4 795 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 BACE2Q9Y5Z0 518 aa23.79■■□□□ 1.4
IRF3-228ENST00000601291 MYO1FO00160 1098 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 FANCGO15287 622 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 TBC1D4O60343 1298 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 BEST1O76090 585 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 KRT3P12035 628 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 CDR1P51861 262 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 CFAP221Q4G0U5 840 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 FAM102AQ5T9C2 384 aaPredicted RBP23.78■■□□□ 1.4
IRF3-228ENST00000601291 PRSS55Q6UWB4 352 aaPredicted RBP23.78■■□□□ 1.4
IRF3-228ENST00000601291 FAM183BPQ6ZVS7 135 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 SLFN11Q7Z7L1 901 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 MCEEQ96PE7 176 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 LRRC4Q9HBW1 653 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 RWDD3Q9Y3V2 267 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 KIAA1671Q9BY89 1806 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 SIGLEC16A6NMB1 481 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 PIK3R2O00459 728 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 FGF18O76093 207 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 FTCDO95954 541 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 URODP06132 367 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 ARPP19P56211 112 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 DSG1Q02413 1049 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 MESDQ14696 234 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 PPP1R15BQ5SWA1 713 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 PEX26Q7Z412 305 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 RHOBTB2Q9BYZ6 727 aa23.78■■□□□ 1.4
IRF3-228ENST00000601291 ABI2Q9NYB9 513 aaPredicted RBP23.78■■□□□ 1.4
IRF3-228ENST00000601291 TMEM110-MUSTN1A8MSY1 372 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 ENC1O14682 589 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 LINC00271P0C7V0 271 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 LCP1P13796 627 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 GPR17Q13304 367 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 SIX6OS1Q8N1H7 587 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 C2orf15Q8WU43 125 aaKnown RBP23.77■■□□□ 1.4
IRF3-228ENST00000601291 UBE2Q2Q8WVN8 375 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 ABCB6Q9NP58 842 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 PNPLA8Q9NP80 782 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 METTL5Q9NRN9 209 aaKnown RBP23.77■■□□□ 1.4
IRF3-228ENST00000601291 AMFRQ9UKV5 643 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 CDY1Q9Y6F8 540 aa23.77■■□□□ 1.4
IRF3-228ENST00000601291 TMEM191CA6NGB0 347 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 C2CD2LO14523 706 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 ATP1A1P05023 1023 aaKnown RBP23.76■■□□□ 1.39
IRF3-228ENST00000601291 SCNN1AP37088 669 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 CACNA2D1P54289 1103 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 SLC6A3Q01959 620 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 ADIGQ0VDE8 80 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 C9orf50Q5SZB4 431 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 MEI1Q5TIA1 1274 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 SLC8B1Q6J4K2 584 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 OLFML1Q6UWY5 402 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 VSTM1Q6UX27 236 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 VPS52Q8N1B4 723 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 FBXO22Q8NEZ5 403 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 ZMIZ2Q8NF64 920 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 BTBD6Q96KE9 485 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 KCNK16Q96T55 309 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 GOLPH3Q9H4A6 298 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 IP6K2Q9UHH9 426 aa23.76■■□□□ 1.39
IRF3-228ENST00000601291 PAPSS1O43252 624 aaPredicted RBP23.75■■□□□ 1.39
IRF3-228ENST00000601291 GJB6O95452 261 aa23.75■■□□□ 1.39
IRF3-228ENST00000601291 GRIK1P39086 918 aa23.75■■□□□ 1.39
IRF3-228ENST00000601291 RPL7AP62424 266 aaKnown RBP23.75■■□□□ 1.39
IRF3-228ENST00000601291 SCUBE3Q8IX30 993 aa23.75■■□□□ 1.39
IRF3-228ENST00000601291 SPPL2BQ8TCT7 592 aa23.75■■□□□ 1.39
IRF3-228ENST00000601291 ALG6Q9Y672 507 aa23.75■■□□□ 1.39
IRF3-228ENST00000601291 LCHNA4D1U4 455 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 TRIM66O15016 1216 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 URI1O94763 535 aaPredicted RBP23.74■■□□□ 1.39
IRF3-228ENST00000601291 FBXO21O94952 628 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 CYP2F1P24903 491 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 CTNNB1P35222 781 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 SLC1A1P43005 524 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 MAGEA11P43364 429 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 TKTL1P51854 596 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 CREMQ03060 361 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 RSPO2Q6UXX9 243 aaPredicted RBP23.74■■□□□ 1.39
IRF3-228ENST00000601291 NT5DC3Q86UY8 548 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 GPR65Q8IYL9 337 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.74■■□□□ 1.39
IRF3-228ENST00000601291 PGLYRP2Q96PD5 576 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 TRIM7Q9C029 511 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 MRPL17Q9NRX2 175 aaKnown RBP23.74■■□□□ 1.39
IRF3-228ENST00000601291 TMEM30AQ9NV96 361 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 SSX2IPQ9Y2D8 614 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 NLRC5Q86WI3 1866 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 MTMR11A4FU01 709 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 SPOPO43791 374 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 GABBR2O75899 941 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 PROSCO94903 275 aa23.74■■□□□ 1.39
IRF3-228ENST00000601291 BMPR1AP36894 532 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms