RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 COMMD8Q9NX08 183 aa16.65■□□□□ 0.26
IRF3-226ENST00000600453 NCANO14594 1321 aa16.65■□□□□ 0.26
IRF3-226ENST00000600453 F8VP50 259 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 HLA-DRAP01903 254 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 LMNAP02545 664 aaKnown RBP16.64■□□□□ 0.25
IRF3-226ENST00000600453 CHRNB1P11230 501 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 CTHP32929 405 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 PIK3CAP42336 1068 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 CCR3P51677 355 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 CDH8P55286 799 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 MCCD1P59942 119 aaPredicted RBP16.64■□□□□ 0.25
IRF3-226ENST00000600453 NR1H3Q13133 447 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 PNOCQ13519 176 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 RUNX3Q13761 415 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 CCDC142Q17RM4 750 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 NUP93Q8N1F7 819 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 CRYBG2Q8N1P7 616 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 KIAA1958Q8N8K9 716 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 STKLD1Q8NE28 680 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 ENGASEQ8NFI3 743 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 OVCA2Q8WZ82 227 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 SMARCE1Q969G3 411 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 FAXDC2Q96IV6 333 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 B3GNT5Q9BYG0 378 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 DPEP3Q9H4B8 488 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 PCDHGA2Q9Y5H1 932 aa16.64■□□□□ 0.25
IRF3-226ENST00000600453 KINO60870 393 aaKnown RBP16.63■□□□□ 0.25
IRF3-226ENST00000600453 EPB41P11171 864 aaKnown RBP16.63■□□□□ 0.25
IRF3-226ENST00000600453 TCF3P15923 654 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 YWHAQP27348 245 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 PPP1R2P41236 205 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 MTAPQ13126 283 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 STIM1Q13586 685 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 KRT39Q6A163 491 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 ASCL5Q7RTU5 278 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 MAML2Q8IZL2 1156 aaPredicted RBP16.63■□□□□ 0.25
IRF3-226ENST00000600453 SPEM1Q8N4L4 309 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 TTC39CQ8N584 583 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 PDZD8Q8NEN9 1154 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 SMARCD1Q96GM5 515 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 CYP2S1Q96SQ9 504 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 ZNF518BQ9C0D4 1074 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 TMEM8AQ9HCN3 771 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 ZSCAN32Q9NX65 697 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 CCL26Q9Y258 94 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 NME7Q9Y5B8 376 aa16.63■□□□□ 0.25
IRF3-226ENST00000600453 PTPRDP23468 1912 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 GREB1Q4ZG55 1949 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 TADA3O75528 432 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 PRCPP42785 496 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 CXCL12P48061 93 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 GCLMP48507 274 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
IRF3-226ENST00000600453 MTF1Q14872 753 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 ZCWPW2Q504Y3 356 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 C1orf220Q5T0J3 134 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 SCARA5Q6ZMJ2 495 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 ACOT1Q86TX2 421 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 CPA6Q8N4T0 437 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 ARL14EPQ8N8R7 260 aaPredicted RBP16.62■□□□□ 0.25
IRF3-226ENST00000600453 TTC8Q8TAM2 541 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 SPATA20Q8TB22 786 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 OSCP1Q8WVF1 389 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 FAM124BQ9H5Z6 455 aaPredicted RBP16.62■□□□□ 0.25
IRF3-226ENST00000600453 DMAP1Q9NPF5 467 aaPredicted RBP16.62■□□□□ 0.25
IRF3-226ENST00000600453 DUS2Q9NX74 493 aaKnown RBP16.62■□□□□ 0.25
IRF3-226ENST00000600453 CIZ1Q9ULV3 898 aaPredicted RBP16.62■□□□□ 0.25
IRF3-226ENST00000600453 ARHGAP26Q9UNA1 814 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 PCDHA5Q9Y5H7 936 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 R4GN57 208 aa16.62■□□□□ 0.25
IRF3-226ENST00000600453 OBSL1O75147 1896 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 ANAPC1Q9H1A4 1944 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 ZNF840PA6NDX5 716 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 CLDN5O00501 218 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 ABL1P00519 1130 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 RAP1GAPP47736 663 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 SOX9P48436 509 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 IFNAR2P48551 515 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 NDST1P52848 882 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 USP46P62068 366 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 LRRC63Q05C16 580 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 TNK2Q07912 1038 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 PPP3CAQ08209 521 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 GRSF1Q12849 480 aaKnown RBP eCLIP16.61■□□□□ 0.25
IRF3-226ENST00000600453 TAF10Q12962 218 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 WDR44Q5JSH3 913 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 ATP2A3Q93084 1043 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 NT5C1AQ9BXI3 368 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 EBF3Q9H4W6 596 aa16.61■□□□□ 0.25
IRF3-226ENST00000600453 PRMT8Q9NR22 394 aaPredicted RBP16.61■□□□□ 0.25
IRF3-226ENST00000600453 FANCMQ8IYD8 2048 aa16.6■□□□□ 0.25
IRF3-226ENST00000600453 COL4A2P08572 1712 aa16.6■□□□□ 0.25
IRF3-226ENST00000600453 C2orf78A6NCI8 922 aa16.6■□□□□ 0.25
IRF3-226ENST00000600453 TRDMT1O14717 391 aaKnown RBP16.6■□□□□ 0.25
IRF3-226ENST00000600453 SLC9A3R1O14745 358 aaPredicted RBP16.6■□□□□ 0.25
IRF3-226ENST00000600453 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
IRF3-226ENST00000600453 ATG13O75143 517 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms