RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TSPAN18Q96SJ8 248 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 LARP6Q9BRS8 491 aaKnown RBP18.98■□□□□ 0.63
SSBP4-207ENST00000600244 NTPCRQ9BSD7 190 aaKnown RBP18.98■□□□□ 0.63
SSBP4-207ENST00000600244 PRDM16Q9HAZ2 1276 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 IL21RQ9HBE5 538 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 DSEQ9UL01 958 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 PCDHB5Q9Y5E4 795 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 ANK1P16157 1881 aa18.98■□□□□ 0.63
SSBP4-207ENST00000600244 TEX51A0A1B0GUA7 166 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 C2orf78A6NCI8 922 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 GNSP15586 552 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 GRIA2P42262 883 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 DHCR24Q15392 516 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 C9orf57Q5W0N0 161 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 ZPBP2Q6X784 338 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 PHTF2Q8N3S3 785 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 KIAA1958Q8N8K9 716 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 ANAPC1Q9H1A4 1944 aa18.97■□□□□ 0.63
SSBP4-207ENST00000600244 ANO9A1A5B4 782 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 CLDN3O15551 220 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 TLX3O43711 291 aaPredicted RBP18.96■□□□□ 0.63
SSBP4-207ENST00000600244 ZNF217O75362 1048 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 PRPF40AO75400 957 aaKnown RBP18.96■□□□□ 0.63
SSBP4-207ENST00000600244 CD2BP2O95400 341 aaKnown RBP18.96■□□□□ 0.63
SSBP4-207ENST00000600244 HDCP19113 662 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 MAOBP27338 520 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 KRT2P35908 639 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 TNFSF9P41273 254 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 PPP2R3AQ06190 1150 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 SRSF1Q07955 248 aaKnown RBP eCLIP18.96■□□□□ 0.63
SSBP4-207ENST00000600244 MAPK7Q13164 816 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 STK3Q13188 491 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 SAFBQ15424 915 aaKnown RBP eCLIP18.96■□□□□ 0.63
SSBP4-207ENST00000600244 DDR2Q16832 855 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 SYCP2LQ5T4T6 812 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 GPR155Q7Z3F1 870 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 DCP1BQ8IZD4 617 aaKnown RBP18.96■□□□□ 0.63
SSBP4-207ENST00000600244 SPRYD3Q8NCJ5 442 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 ERMNQ8TAM6 284 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 KCNV2Q8TDN2 545 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 CD248Q9HCU0 757 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 ARHGEF4Q9NR80 690 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 TM7SF3Q9NS93 570 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 PCDHGB2Q9Y5G2 931 aa18.96■□□□□ 0.63
SSBP4-207ENST00000600244 MGAQ8IWI9 3026 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 A0A1W2PQF6 199 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 CYB561D2O14569 222 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 SLC16A4O15374 487 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 PFKFB2O60825 505 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 HLA-EP13747 358 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 KCNC4Q03721 635 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 WSCD1Q658N2 575 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 RHBDF2Q6PJF5 856 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 LRRC69Q6ZNQ3 347 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 METTL23Q86XA0 190 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 RHBDD1Q8TEB9 315 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 DNASE2BQ8WZ79 361 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 HCN2Q9UL51 889 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 CYP8B1Q9UNU6 501 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 LIMCH1Q9UPQ0 1083 aa18.95■□□□□ 0.62
SSBP4-207ENST00000600244 MUC22E2RYF6 1773 aaPredicted RBP18.95■□□□□ 0.62
SSBP4-207ENST00000600244 A0A1B0GTW7 788 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 LEFTY2O00292 366 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 FLRT2O43155 660 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 DTNBO60941 627 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 HIP1RO75146 1068 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 CILPO75339 1184 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 RPL10AP62906 217 aaKnown RBP18.94■□□□□ 0.62
SSBP4-207ENST00000600244 BNC1Q01954 994 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 KCNB1Q14721 858 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 ENOX2Q16206 610 aaKnown RBP18.94■□□□□ 0.62
SSBP4-207ENST00000600244 ME3Q16798 604 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 PTPRNQ16849 979 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 WDR45BQ5MNZ6 344 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 FOXJ1Q92949 421 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 GAREM1Q9H706 876 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 C17orf75Q9HAS0 396 aa18.94■□□□□ 0.62
SSBP4-207ENST00000600244 FNDC3AQ9Y2H6 1198 aaKnown RBP18.94■□□□□ 0.62
SSBP4-207ENST00000600244 CABIN1Q9Y6J0 2220 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 SCN1AP35498 2009 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 PTPN13Q12923 2485 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 MYOFQ9NZM1 2061 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 GOLGA8CPA6NN73 597 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 PLK4O00444 970 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 FAM189A1O60320 539 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 CDKL5O76039 1030 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 NFICP08651 508 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 ATP2C1P98194 919 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-207ENST00000600244 STRN3Q13033 797 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 RESTQ13127 1097 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 NFE2Q16621 373 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-207ENST00000600244 LEO1Q8WVC0 666 aaPredicted RBP18.93■□□□□ 0.62
SSBP4-207ENST00000600244 CCSER1Q9C0I3 900 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 IGSF5Q9NSI5 407 aa18.93■□□□□ 0.62
SSBP4-207ENST00000600244 KNL1Q8NG31 2342 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 ATMQ13315 3056 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 HOXB2P14652 356 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 NDUFV2P19404 249 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 CYP2F1P24903 491 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms