RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PRKAG3Q9UGI9 489 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 USTQ9Y2C2 406 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 PATJQ8NI35 1801 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 TRIOO75962 3097 aa14.57□□□□□ -0.08
VRK3-219ENST00000600137 FAM92AA1XBS5 289 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 C2CD4DB7Z1M9 353 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 TULP2O00295 520 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 TRIM66O15016 1216 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 TADA3O75528 432 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 GABBR2O75899 941 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 MICAL2O94851 1124 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 TPM2P07951 284 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 CFHP08603 1231 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 CSH1P0DML2 217 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 CSH2P0DML3 217 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 GJA1P17302 382 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 FSHRP23945 695 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 SGO2Q562F6 1265 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 LCLAT1Q6UWP7 414 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 GPRIN1Q7Z2K8 1008 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 ANKRD52Q8NB46 1076 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 ZNF606Q8WXB4 792 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 TRMT2BQ96GJ1 504 aaKnown RBP14.56□□□□□ -0.08
VRK3-219ENST00000600137 NECAB3Q96P71 396 aaPredicted RBP14.56□□□□□ -0.08
VRK3-219ENST00000600137 DMAP1Q9NPF5 467 aaPredicted RBP14.56□□□□□ -0.08
VRK3-219ENST00000600137 KRT82Q9NSB4 513 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 FAM207AQ9NSI2 230 aaPredicted RBP14.56□□□□□ -0.08
VRK3-219ENST00000600137 TSPAN16Q9UKR8 245 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 FAM50BQ9Y247 325 aa14.56□□□□□ -0.08
VRK3-219ENST00000600137 A0A1W2PQC6 194 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 GOLGA6L19H0YKK7 550 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 CYP26A1O43174 497 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 FAM200BP0CF97 657 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 CD19P15391 556 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 NPR3P17342 541 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 CEBPBP17676 345 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 RFX1P22670 979 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 BRD2P25440 801 aaKnown RBP14.55□□□□□ -0.08
VRK3-219ENST00000600137 MAP3K7CLP57077 242 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 POLR2FP61218 127 aaKnown RBP14.55□□□□□ -0.08
VRK3-219ENST00000600137 DENND5BQ6ZUT9 1274 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 ITIH5Q86UX2 942 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 NPAS3Q8IXF0 933 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 SCAMP5Q8TAC9 235 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 FGF13Q92913 245 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 ZSWIM3Q96MP5 696 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 UBXN6Q9BZV1 441 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 TTYH3Q9C0H2 523 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 ASAH2Q9NR71 780 aa14.55□□□□□ -0.08
VRK3-219ENST00000600137 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.55□□□□□ -0.08
VRK3-219ENST00000600137 F8VZ95 297 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 SERPINC1P01008 464 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 MYL4P12829 197 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 LAMP2P13473 410 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 KRT5P13647 590 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 GABRR2P28476 465 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 PGFP49763 221 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 UBASH3AP57075 661 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 PDE4CQ08493 712 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 VEPH1Q14D04 833 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 GOLGA7BQ2TAP0 167 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 RAB41Q5JT25 222 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 STXBP5Q5T5C0 1151 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 CYP4A22Q5TCH4 519 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 NUP93Q8N1F7 819 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 ELMOD1Q8N336 334 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 LEMD2Q8NC56 503 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 UBA3Q8TBC4 463 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 SLC35F5Q8WV83 523 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 DDX1Q92499 740 aaKnown RBP14.54□□□□□ -0.08
VRK3-219ENST00000600137 BAP1Q92560 729 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 RPGRIP1Q96KN7 1286 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 PNPLA8Q9NP80 782 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 NLRC4Q9NPP4 1024 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.54□□□□□ -0.08
VRK3-219ENST00000600137 IFNKQ9P0W0 207 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 EPS15L1Q9UBC2 864 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 CDH7Q9ULB5 785 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 MRPS23Q9Y3D9 190 aaKnown RBP14.54□□□□□ -0.08
VRK3-219ENST00000600137 DAAM1Q9Y4D1 1078 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 USP3Q9Y6I4 520 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 ATP8B3O60423 1300 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 MUC3AQ02505 3323 aa14.54□□□□□ -0.08
VRK3-219ENST00000600137 A0A1W2PRU2 124 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 ZNF197O14709 1029 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 ZDHHC11BP0C7U3 371 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 SP100P23497 879 aaPredicted RBP14.53□□□□□ -0.08
VRK3-219ENST00000600137 SSTR3P32745 418 aaPredicted RBP14.53□□□□□ -0.08
VRK3-219ENST00000600137 GPD2P43304 727 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 RPL34P49207 117 aaKnown RBP14.53□□□□□ -0.08
VRK3-219ENST00000600137 KIF11P52732 1056 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 SLC5A3P53794 718 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 TPM4P67936 248 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 RAPGEF1Q13905 1077 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 TEAD2Q15562 447 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 FILIP1LQ4L180 1135 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 PDZD4Q76G19 769 aaPredicted RBP14.53□□□□□ -0.08
VRK3-219ENST00000600137 GET4Q7L5D6 327 aaPredicted RBP14.53□□□□□ -0.08
VRK3-219ENST00000600137 OTOP3Q7RTS5 596 aa14.53□□□□□ -0.08
VRK3-219ENST00000600137 PIGZQ86VD9 579 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms