RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 EXOC4Q96A65 974 aa19.99■□□□□ 0.79
PNKP-213ENST00000599543 PCED1BQ96HM7 432 aa19.99■□□□□ 0.79
PNKP-213ENST00000599543 CYP2S1Q96SQ9 504 aa19.99■□□□□ 0.79
PNKP-213ENST00000599543 MRPL45Q9BRJ2 306 aaKnown RBP19.99■□□□□ 0.79
PNKP-213ENST00000599543 C2orf42Q9NWW7 574 aa19.99■□□□□ 0.79
PNKP-213ENST00000599543 DUS2Q9NX74 493 aaKnown RBP19.99■□□□□ 0.79
PNKP-213ENST00000599543 EHD2Q9NZN4 543 aa19.99■□□□□ 0.79
PNKP-213ENST00000599543 C2orf78A6NCI8 922 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 TRDMT1O14717 391 aaKnown RBP19.98■□□□□ 0.79
PNKP-213ENST00000599543 EXOC3O60645 756 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 CLSTN1O94985 981 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 LMNB2Q03252 620 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 USP4Q13107 963 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 RSPO4Q2I0M5 234 aaPredicted RBP19.98■□□□□ 0.79
PNKP-213ENST00000599543 MDH1BQ5I0G3 518 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 KRBA2Q6ZNG9 492 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 DENND5BQ6ZUT9 1274 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 ARL14EPQ8N8R7 260 aaPredicted RBP19.98■□□□□ 0.79
PNKP-213ENST00000599543 OSCP1Q8WVF1 389 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 ATP2A3Q93084 1043 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 SLC22A12Q96S37 553 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 MYO16Q9Y6X6 1858 aa19.98■□□□□ 0.79
PNKP-213ENST00000599543 PHACTR2O75167 634 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 SDHBP21912 280 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 IFNAR2P48551 515 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 FSTL4Q6MZW2 842 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.97■□□□□ 0.79
PNKP-213ENST00000599543 FMR1NBQ8N0W7 255 aaPredicted RBP19.97■□□□□ 0.79
PNKP-213ENST00000599543 SYAP1Q96A49 352 aaPredicted RBP19.97■□□□□ 0.79
PNKP-213ENST00000599543 CHFRQ96EP1 664 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 EXOC1Q9NV70 894 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 DLL3Q9NYJ7 618 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 SPTBN2O15020 2390 aa19.97■□□□□ 0.79
PNKP-213ENST00000599543 SDK1Q7Z5N4 2213 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 MYH10P35580 1976 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 NCOR2Q9Y618 2525 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 PRR5-ARHGAP8B1AHC4 643 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 HRO43593 1189 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 KLRC4O43908 158 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 ATG13O75143 517 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 STAU1O95793 577 aaKnown RBP19.96■□□□□ 0.79
PNKP-213ENST00000599543 FAM163BP0C2L3 166 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 HDCP19113 662 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 HOXA6P31267 233 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 ATICP31939 592 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 MYL6P60660 151 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 ARHGAP8P85298 464 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 SRSF5Q13243 272 aaKnown RBP19.96■□□□□ 0.79
PNKP-213ENST00000599543 BIRC3Q13489 604 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 SH3RF2Q8TEC5 729 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 ERCC4Q92889 916 aaPredicted RBP19.96■□□□□ 0.79
PNKP-213ENST00000599543 P2RY13Q9BPV8 354 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 ECT2Q9H8V3 914 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 TRPM5Q9NZQ8 1165 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 GCNT4Q9P109 453 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 NXF1Q9UBU9 619 aaKnown RBP19.96■□□□□ 0.79
PNKP-213ENST00000599543 USP25Q9UHP3 1055 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 ARHGAP26Q9UNA1 814 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 WNT6Q9Y6F9 365 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 KIAA1549LQ6ZVL6 1849 aa19.96■□□□□ 0.79
PNKP-213ENST00000599543 A8MXQ7 604 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 F8VP50 259 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 EGFP01133 1207 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 RETP07949 1114 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 PFKLP17858 780 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 PTPN1P18031 435 aaKnown RBP19.95■□□□□ 0.78
PNKP-213ENST00000599543 DRD1P21728 446 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 GJA4P35212 333 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 CASP4P49662 377 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 USP46P62068 366 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 NOP14P78316 857 aaKnown RBP19.95■□□□□ 0.78
PNKP-213ENST00000599543 SPEM2Q0P670 501 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 PKN3Q6P5Z2 889 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 CEP68Q76N32 757 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 ENGASEQ8NFI3 743 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 ZNF516Q92618 1163 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 C8orf48Q96LL4 319 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 ELOVL4Q9GZR5 314 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 GZF1Q9H116 711 aaPredicted RBP19.95■□□□□ 0.78
PNKP-213ENST00000599543 DPEP3Q9H4B8 488 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 PARD6AQ9NPB6 346 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 CDV3Q9UKY7 258 aaKnown RBP19.95■□□□□ 0.78
PNKP-213ENST00000599543 SLC8A2Q9UPR5 921 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 NME7Q9Y5B8 376 aa19.95■□□□□ 0.78
PNKP-213ENST00000599543 EML5Q05BV3 1969 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 LRP3O75074 770 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 RNF40O75150 1001 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 PPP3CCP48454 512 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 AP3M2P53677 418 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 PNOCQ13519 176 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 ZNF699Q32M78 642 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 EML3Q32P44 896 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 KMT5BQ4FZB7 885 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 TDRD10Q5VZ19 366 aaKnown RBP19.94■□□□□ 0.78
PNKP-213ENST00000599543 WDR5BQ86VZ2 330 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 B3GALNT2Q8NCR0 500 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 KIAA0895Q8NCT3 520 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 TTLL2Q9BWV7 592 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 XYLT2Q9H1B5 865 aa19.94■□□□□ 0.78
PNKP-213ENST00000599543 RPN1P04843 607 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms