RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 RBM41Q96IZ5 413 aaKnown RBP11.73□□□□□ -0.53
ZNF544-213ENST00000599227 FAM81BQ96LP2 452 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 RAB3IPQ96QF0 476 aaPredicted RBP11.73□□□□□ -0.53
ZNF544-213ENST00000599227 B3GNT5Q9BYG0 378 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SMYD3Q9H7B4 428 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 CNTNAP1P78357 1384 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 LPXNO60711 386 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 LGR5O75473 907 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 UNC5CO95185 931 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 EDN1P05305 212 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 INSRRP14616 1297 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 EIF3EP60228 445 aaKnown RBP11.73□□□□□ -0.53
ZNF544-213ENST00000599227 CCDC142Q17RM4 750 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 C9orf131Q5VYM1 1079 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 DENND1BQ6P3S1 775 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 HESX1Q9UBX0 185 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 NHSQ6T4R5 1651 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 GOLGA8TH3BQL2 631 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 FGFR1P11362 822 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SERPINB3P29508 390 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 CAV1Q03135 178 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 CENPCQ03188 943 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 LAMTOR4Q0VGL1 99 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SPDYCQ5MJ68 293 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 ATF7IP2Q5U623 682 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 KIAA0319LQ8IZA0 1049 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 PDIK1LQ8N165 341 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SLC25A41Q8N5S1 370 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 EXD1Q8NHP7 514 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SPATA18Q8TC71 538 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 SPATC1LQ9H0A9 340 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 RNPEPQ9H4A4 650 aa11.73□□□□□ -0.53
ZNF544-213ENST00000599227 PIN4Q9Y237 131 aaKnown RBP11.73□□□□□ -0.53
ZNF544-213ENST00000599227 A8MXQ7 604 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 GYG2O15488 501 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 MTA2O94776 668 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 C4BPAP04003 597 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 CCND1P24385 295 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 IREB2P48200 963 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ZCCHC23Q6ZST2 131 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 BZW1Q7L1Q6 419 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 RCOR2Q8IZ40 523 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ZCCHC9Q8N567 271 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 PDCD7Q8N8D1 485 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 BHMTQ93088 406 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 FAF2Q96CS3 445 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 MRPL4Q9BYD3 311 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 MAGEB5Q9BZ81 275 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 PSMC3IPQ9P2W1 217 aaPredicted RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 CLGNO14967 610 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 USP12O75317 370 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ARIH2O95376 493 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ENO1P06733 434 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 NFICP08651 508 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 PYGBP11216 843 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 MUTP22033 750 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 GTF2A2P52657 109 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ARL4CP56559 192 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 CAPSQ13938 189 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 TFDP3Q5H9I0 405 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 C12orf56Q8IXR9 622 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 C12orf50Q8NA57 414 aaPredicted RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 FAM13CQ8NE31 585 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 OPTNQ96CV9 577 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 PGLYRP2Q96PD5 576 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 PPARGC1AQ9UBK2 798 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 COQ4Q9Y3A0 265 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 PSTPIP1O43586 416 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ELK3P41970 407 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ARFIP2P53365 341 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 LMNB2Q03252 620 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 ZNF268Q14587 947 aaPredicted RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 CAPRIN2Q6IMN6 1127 aaKnown RBP11.72□□□□□ -0.53
ZNF544-213ENST00000599227 TMEM109Q9BVC6 243 aa11.72□□□□□ -0.53
ZNF544-213ENST00000599227 PRPSAP2O60256 369 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 RGS20O76081 388 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 ESRRAP11474 423 aaPredicted RBP11.71□□□□□ -0.53
ZNF544-213ENST00000599227 ATXN1P54253 815 aaKnown RBP11.71□□□□□ -0.53
ZNF544-213ENST00000599227 VCPP55072 806 aaKnown RBP11.71□□□□□ -0.53
ZNF544-213ENST00000599227 PTK7Q13308 1070 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 ENOSF1Q7L5Y1 443 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 FAM131BQ86XD5 332 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 ANKLE1Q8NAG6 615 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 STKLD1Q8NE28 680 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 CCDC110Q8TBZ0 833 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 PTPRN2Q92932 1015 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 UTP4Q969X6 686 aaKnown RBP11.71□□□□□ -0.53
ZNF544-213ENST00000599227 TXNRD2Q9NNW7 524 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 TXNDC16Q9P2K2 825 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 HMGXB4Q9UGU5 601 aa11.71□□□□□ -0.53
ZNF544-213ENST00000599227 KCNN4O15554 427 aa11.71□□□□□ -0.54
ZNF544-213ENST00000599227 HAUS5O94927 633 aa11.71□□□□□ -0.54
ZNF544-213ENST00000599227 ASMTLO95671 621 aa11.71□□□□□ -0.54
ZNF544-213ENST00000599227 TOP3BO95985 862 aaKnown RBP11.71□□□□□ -0.54
ZNF544-213ENST00000599227 IL1R2P27930 398 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms