RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 GNL1P36915 607 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 PNPLA4P41247 253 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 CDKN2BP42772 138 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 RAB6CQ53S08 254 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 SH3PXD2AQ5TCZ1 1133 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 POLNQ7Z5Q5 900 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 OR2W6PQ8NHA6 318 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 UBLCP1Q8WVY7 318 aaPredicted RBP17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 SLC4A5Q9BY07 1137 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 RAB6CQ9H0N0 254 aa17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 DDX56Q9NY93 547 aaKnown RBP17.92■□□□□ 0.46
SHKBP1-216ENST00000598201 GRAP2O75791 330 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 EN2P19622 333 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 THPOP40225 353 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 MLH1P40692 756 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 TAF5Q15542 800 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 TRIP13Q15645 432 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 PTGISQ16647 500 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 ARHGAP17Q68EM7 881 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 RPAINQ86UA6 219 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 OSTM1Q86WC4 334 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 CRYBG2Q8N1P7 616 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 ANKLE1Q8NAG6 615 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 APPL2Q8NEU8 664 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 ATL2Q8NHH9 583 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 PCSK1NQ9UHG2 260 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 ATP8A1Q9Y2Q0 1164 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 NEU2Q9Y3R4 380 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 CCDC85CA6NKD9 419 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 C2CD4BA6NLJ0 364 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 IVDP26440 423 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 MIPP30301 263 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 LRPAP1P30533 357 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 CETN2P41208 172 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 MNX1P50219 401 aaPredicted RBP17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 COPS2P61201 443 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 SV2CQ496J9 727 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 OLFML1Q6UWY5 402 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 GOLGA6L1Q8N7Z2 621 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 ART4Q93070 314 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 CCDC114Q96M63 670 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 GAD1Q99259 594 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 SNX25Q9H3E2 840 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 HOMER3Q9NSC5 361 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 MIOSQ9NXC5 875 aa17.91■□□□□ 0.46
SHKBP1-216ENST00000598201 GOLGA8KD6RF30 607 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 ADORA2BP29275 332 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 PTPN7P35236 360 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 ZNF143P52747 638 aaPredicted RBP17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 PTK6Q13882 451 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 CCDC142Q17RM4 750 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 TFDP3Q5H9I0 405 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 TMEM110Q86TL2 294 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 SCUBE3Q8IX30 993 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 ADGRF2Q8IZF7 708 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 RXFP2Q8WXD0 754 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 KHSRPQ92945 711 aaKnown RBP eCLIP17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 B3GNT5Q9BYG0 378 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 CHST12Q9NRB3 414 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 HESX1Q9UBX0 185 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 PHF24Q9UPV7 400 aa17.9■□□□□ 0.46
SHKBP1-216ENST00000598201 GOLGA6CA6NDK9 693 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 PAPSS1O43252 624 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 MGEA5O60502 916 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 CABYRO75952 493 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 TJP3O95049 919 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 CD48P09326 243 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 GOLGA6DP0CG33 693 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 GHRP10912 638 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 CD52P31358 61 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 C15orf59Q2T9L4 293 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 ODF2Q5BJF6 829 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 PRUNE1Q86TP1 453 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 EXOC4Q96A65 974 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 GLT1D1Q96MS3 346 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 PEBP4Q96S96 227 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 EPB41L4BQ9H329 900 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 TRMT13Q9NUP7 481 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 GOLGA6AQ9NYA3 693 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 ASIC3Q9UHC3 531 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 PADI3Q9ULW8 664 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 LIASO43766 372 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 HUS1O60921 280 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 KRT7P08729 469 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 SETSIPP0DME0 302 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 PDGFRAP16234 1089 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 GPD1P21695 349 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 GBP1P32455 592 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 MTMR3Q13615 1198 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 HADHQ16836 314 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 CEP85LQ5SZL2 805 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 UBAP2Q5T6F2 1119 aaKnown RBP17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 LRIG3Q6UXM1 1119 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 AGMOQ6ZNB7 445 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 SYDE1Q6ZW31 735 aaPredicted RBP17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 GRK7Q8WTQ7 553 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 HAUS1Q96CS2 278 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 CNPY3Q9BT09 278 aa17.89■□□□□ 0.45
SHKBP1-216ENST00000598201 DNPEPQ9ULA0 475 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms