RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 STK39Q9UEW8 545 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 PCDHB12Q9Y5F1 795 aa15.55■□□□□ 0.08
SHKBP1-211ENST00000595945 COL4A4P53420 1690 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 SCNN1AP37088 669 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 MAGEA11P43364 429 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 GLUD2P49448 558 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 NAP1L1P55209 391 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 PSMD5Q16401 504 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 CFAP221Q4G0U5 840 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 SLC39A12Q504Y0 691 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 RAB41Q5JT25 222 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 SLC8B1Q6J4K2 584 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 RIN2Q8WYP3 895 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 GDF15Q99988 308 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 MRPL47Q9HD33 250 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 PNPLA8Q9NP80 782 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 ST7Q9NRC1 585 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 PARVAQ9NVD7 372 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 DNAI1Q9UI46 699 aa15.54■□□□□ 0.08
SHKBP1-211ENST00000595945 MYO9BQ13459 2157 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 ATG2AQ2TAZ0 1938 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 LINC01553A4QN01 128 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 TMEM191CA6NGB0 347 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 SIGLEC16A6NMB1 481 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 PAPSS1O43252 624 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 BUB1BO60566 1050 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 LILRB3O75022 631 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 FGF18O76093 207 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 GJB6O95452 261 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 VNN2O95498 520 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 BDNFP23560 247 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 CASQ1P31415 396 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 MAP3K7CLP57077 242 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 SLC8A3P57103 927 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 SNX16P57768 344 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 TAP1Q03518 808 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 SMARCB1Q12824 385 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 DNAJC24Q6P3W2 148 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 OLFML1Q6UWY5 402 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 FAM183BPQ6ZVS7 135 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 SPATA2LQ8IUW3 424 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 FEZF2Q8TBJ5 459 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 RNPC3Q96LT9 517 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 NAPGQ99747 312 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 TRIM7Q9C029 511 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 ZBP1Q9H171 429 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 SYNCQ9H7C4 482 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 DMAP1Q9NPF5 467 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 PCDHB5Q9Y5E4 795 aa15.53■□□□□ 0.08
SHKBP1-211ENST00000595945 MTMR11A4FU01 709 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 GOLGA8SH3BPF8 625 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 ADAM12O43184 909 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 BMPR1AP36894 532 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 RABGGTBP53611 331 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 SLC6A3Q01959 620 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 ADCY1Q08828 1119 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 FAM109BQ6ICB4 259 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 OR6B2Q6IFH4 312 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 ZDHHC17Q8IUH5 632 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 SYCE1Q8N0S2 351 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 VPS52Q8N1B4 723 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 KLHL23Q8NBE8 558 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 FBXO22Q8NEZ5 403 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 KIF18AQ8NI77 898 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 C2orf15Q8WU43 125 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 KHSRPQ92945 711 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 KCNK16Q96T55 309 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 CLSTN3Q9BQT9 956 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 RXFP1Q9HBX9 757 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 TMEM59LQ9UK28 342 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 RWDD3Q9Y3V2 267 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 JRKLQ9Y4A0 524 aa15.52■□□□□ 0.08
SHKBP1-211ENST00000595945 GRXCR1A8MXD5 290 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 ARHGEF15O94989 841 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 ATP1A1P05023 1023 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 URODP06132 367 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 CYP2F1P24903 491 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 CDR1P51861 262 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 RPL7AP62424 266 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 AMPD2Q01433 879 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 KRT17Q04695 432 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 ZNF252P-AS1Q0IIN9 211 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 MEI1Q5TIA1 1274 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 PAPD7Q5XG87 772 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 KIAA1841Q6NSI8 718 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 VSTM1Q6UX27 236 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 RNF19BQ6ZMZ0 732 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 SLC26A9Q7LBE3 791 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 GPRIN1Q7Z2K8 1008 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 NT5DC3Q86UY8 548 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 SCML4Q8N228 414 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 JOSD2Q8TAC2 188 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 SPPL2BQ8TCT7 592 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 FNIP1Q8TF40 1166 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 UBE2Q2Q8WVN8 375 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 PIWIL1Q96J94 861 aaKnown RBP15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 BTBD6Q96KE9 485 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 C8orf48Q96LL4 319 aa15.51■□□□□ 0.07
SHKBP1-211ENST00000595945 SELENOOQ9BVL4 669 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms