RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ECT2Q9H8V3 914 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 EXOC1Q9NV70 894 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 TMEM30AQ9NV96 361 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 TRPM5Q9NZQ8 1165 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 DCHS1Q96JQ0 3298 aa18.17■□□□□ 0.5
CCDC9-202ENST00000595659 A8MXQ7 604 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 TRDMT1O14717 391 aaKnown RBP18.16■□□□□ 0.5
CCDC9-202ENST00000595659 RNF40O75150 1001 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 TGM1P22735 817 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 ZXDBP98169 803 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 FOXK2Q01167 660 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 PUM1Q14671 1186 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC9-202ENST00000595659 TDRD10Q5VZ19 366 aaKnown RBP18.16■□□□□ 0.5
CCDC9-202ENST00000595659 SCARA5Q6ZMJ2 495 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 C12orf56Q8IXR9 622 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 SYNPOQ8N3V7 929 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 CPA6Q8N4T0 437 aa18.16■□□□□ 0.5
CCDC9-202ENST00000595659 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
CCDC9-202ENST00000595659 TCHHQ07283 1943 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 LRRIQ3A6PVS8 624 aaPredicted RBP18.15■□□□□ 0.5
CCDC9-202ENST00000595659 SCAMP3O14828 347 aaKnown RBP18.15■□□□□ 0.5
CCDC9-202ENST00000595659 TRIM66O15016 1216 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 PAPSS2O95340 614 aaPredicted RBP18.15■□□□□ 0.5
CCDC9-202ENST00000595659 DLG4P78352 724 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 USP4Q13107 963 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 EML3Q32P44 896 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 LAIR1Q6GTX8 287 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 B3GALNT2Q8NCR0 500 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 GOLGA5Q8TBA6 731 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 PARD3BQ8TEW8 1205 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 SYAP1Q96A49 352 aaPredicted RBP18.15■□□□□ 0.5
CCDC9-202ENST00000595659 P2RY13Q9BPV8 354 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 RNF38Q9H0F5 515 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.52e-9■■■■■ 149.6
CCDC9-202ENST00000595659 SMPD4Q9NXE4 827 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 DLL3Q9NYJ7 618 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 ZDHHC9Q9Y397 364 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 ZNF292O60281 2723 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 DMXL1Q9Y485 3027 aa18.15■□□□□ 0.5
CCDC9-202ENST00000595659 MED19A0JLT2 244 aaPredicted RBP18.14■□□□□ 0.49
CCDC9-202ENST00000595659 ZNF840PA6NDX5 716 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 VNN1O95497 513 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 C4BPAP04003 597 aaKnown RBP18.14■□□□□ 0.49
CCDC9-202ENST00000595659 PRR29P0C7W0 189 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 CMA1P23946 247 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 ATICP31939 592 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 AMPD2Q01433 879 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 TAF10Q12962 218 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 ORC1Q13415 861 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 NCOA4Q13772 614 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 ZNF699Q32M78 642 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 CEP68Q76N32 757 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 ATP2A3Q93084 1043 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 SPATA32Q96LK8 384 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 SDCBP2Q9H190 292 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 DMAC2Q9NW81 257 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
CCDC9-202ENST00000595659 SPTBN4Q9H254 2564 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 LEFTY2O00292 366 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 STAU1O95793 577 aaKnown RBP18.13■□□□□ 0.49
CCDC9-202ENST00000595659 FAM163BP0C2L3 166 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 PSMD2Q13200 908 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 ZNF667Q5HYK9 610 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.13■□□□□ 0.49
CCDC9-202ENST00000595659 GPR161Q8N6U8 529 aaKnown RBP18.13■□□□□ 0.49
CCDC9-202ENST00000595659 EZH1Q92800 747 aaPredicted RBP18.13■□□□□ 0.49
CCDC9-202ENST00000595659 CD101Q93033 1021 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 KCNK16Q96T55 309 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 MED10Q9BTT4 135 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 TTLL2Q9BWV7 592 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 ELOVL4Q9GZR5 314 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 KCTD10Q9H3F6 313 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 SLC8A2Q9UPR5 921 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 MAPK8IP1Q9UQF2 711 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 HPSEQ9Y251 543 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.13■□□□□ 0.49
CCDC9-202ENST00000595659 OTOGLQ3ZCN5 2332 aa18.13■□□□□ 0.49
CCDC9-202ENST00000595659 NUP210Q8TEM1 1887 aaPredicted RBP18.12■□□□□ 0.49
CCDC9-202ENST00000595659 FANCMQ8IYD8 2048 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 ANTXRLA6NF34 631 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 ATG13O75143 517 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 NR3C1P04150 777 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 RPN1P04843 607 aaKnown RBP18.12■□□□□ 0.49
CCDC9-202ENST00000595659 RETP07949 1114 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 DRD1P21728 446 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 NOP14P78316 857 aaKnown RBP18.12■□□□□ 0.49
CCDC9-202ENST00000595659 LMNB2Q03252 620 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 WDR5BQ86VZ2 330 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 FAM160A2Q8N612 972 aaPredicted RBP18.12■□□□□ 0.49
CCDC9-202ENST00000595659 RPLP0P6Q8NHW5 317 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 HHIPQ96QV1 700 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 CHORDC1Q9UHD1 332 aaPredicted RBP18.12■□□□□ 0.49
CCDC9-202ENST00000595659 CPQQ9Y646 472 aa18.12■□□□□ 0.49
CCDC9-202ENST00000595659 CNR2P34972 360 aa18.11■□□□□ 0.49
CCDC9-202ENST00000595659 SYKP43405 635 aa18.11■□□□□ 0.49
CCDC9-202ENST00000595659 PDE6CP51160 858 aa18.11■□□□□ 0.49
CCDC9-202ENST00000595659 NDUFA8P51970 172 aa18.11■□□□□ 0.49
CCDC9-202ENST00000595659 AP3M2P53677 418 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms