RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 A0A1W2PPM1 405 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 K7ENM7 598 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 FOXN3O00409 490 aaPredicted RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 ASNA1O43681 348 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 SORBS3O60504 671 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 NOL4O94818 638 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 OAS1P00973 400 aaKnown RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 GSTT2P0CG29 244 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 GSTT2BP0CG30 244 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 AKR1B1P15121 316 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 NELFEP18615 380 aaKnown RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 CASP5P51878 434 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 MAP3K10Q02779 954 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 GEN1Q17RS7 908 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 ADCK1Q86TW2 530 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 CCDC103Q8IW40 242 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 DACH2Q96NX9 599 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 ITM2BQ9Y287 266 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 KIF13AQ9H1H9 1805 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 DLGAP3O95886 979 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 CRABP2P29373 138 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 TKTP29401 623 aaKnown RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 CHRNA5P30532 468 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 MGAT5Q09328 741 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 MPP2Q14168 576 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 TTC7BQ86TV6 843 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 NDUFAF2Q8N183 169 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 FAM172AQ8WUF8 416 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 DEPDC1BQ8WUY9 529 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 NRG4Q8WWG1 115 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 SDCCAG3Q96C92 435 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 GLT8D2Q9H1C3 349 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 BLOC1S4Q9NUP1 217 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 SLC7A8Q9UHI5 535 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 AURKCQ9UQB9 309 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 CAB39Q9Y376 341 aaPredicted RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 SNRPAP09012 282 aaKnown RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 IDO1P14902 403 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 ADAM17P78536 824 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 TRAF7Q6Q0C0 670 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 PRUNE1Q86TP1 453 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 PQLC1Q8N2U9 271 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 ZCCHC7Q8N3Z6 543 aaKnown RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 CCDC33Q8N5R6 958 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 LIN28AQ9H9Z2 209 aaKnown RBP12.79□□□□□ -0.36
LIG1-207ENST00000594759 RABL2BQ9UNT1 228 aa12.79□□□□□ -0.36
LIG1-207ENST00000594759 TCRBV5S4A2TA0A5A2 114 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 SH3PXD2BA1X283 911 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 NOTOA8MTQ0 251 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 TFPTP0C1Z6 253 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 C6orf222P0C671 652 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 RARBP10826 455 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 KCNA2P16389 499 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 PPP2R5DQ14738 602 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 MAPK11Q15759 364 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 PABPC1LQ4VXU2 614 aaKnown RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 RSBN1Q5VWQ0 802 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 RFX6Q8HWS3 928 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 CEP95Q96GE4 821 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 C1orf50Q9BV19 199 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 GCOM2Q9BZD3 368 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 TMEM117Q9H0C3 514 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 GANQ9H2C0 597 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ADNPQ9H2P0 1102 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 CHEK2O96017 543 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 CDK4P11802 303 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 MYCLP12524 364 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 RELAQ04206 551 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ORC2Q13416 577 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 DARS2Q6PI48 645 aaKnown RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 UTS2BQ765I0 119 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 PBXIP1Q96AQ6 731 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ZNF512BQ96KM6 892 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 PPP1R36Q96LQ0 422 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 C6orf203Q9P0P8 240 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 GNEQ9Y223 722 aaKnown RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 BCL9O00512 1426 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 USP17L5A8MUK1 530 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 PRR5-ARHGAP8B1AHC4 643 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 TRAFD1O14545 582 aaPredicted RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 PRPF4O43172 522 aaKnown RBP eCLIP12.78□□□□□ -0.361e-6■■■■□ 23.6
LIG1-207ENST00000594759 RFX1P22670 979 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 SSTR1P30872 391 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 INHBCP55103 352 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ARHGAP8P85298 464 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ABCB5Q2M3G0 1257 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ZFP1Q6P2D0 407 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 RNF148Q8N7C7 305 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 DIS3LQ8TF46 1054 aaKnown RBP12.78□□□□□ -0.36
LIG1-207ENST00000594759 SCYL1Q96KG9 808 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ARMC7Q9H6L4 198 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 PACSIN3Q9UKS6 424 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms