RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 BBS12Q6ZW61 710 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 NLRP9Q7RTR0 991 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 RFX6Q8HWS3 928 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 LRRC71Q8N4P6 559 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 XYLT2Q9H1B5 865 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.36
LIG1-206ENST00000594067 SLC17A7Q9P2U7 560 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 DCTN4Q9UJW0 460 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 STRIP2Q9ULQ0 834 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
LIG1-206ENST00000594067 SIGLEC16A6NMB1 481 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 C2CD2LO14523 706 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 FARP2O94887 1054 aaPredicted RBP17.27■□□□□ 0.35
LIG1-206ENST00000594067 PRKCBP05771 671 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 KRT7P08729 469 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 PCK1P35558 622 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 CDH8P55286 799 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 HADHQ16836 314 aaKnown RBP17.27■□□□□ 0.35
LIG1-206ENST00000594067 CTC1Q2NKJ3 1217 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 SYCP2LQ5T4T6 812 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 RNF149Q8NC42 400 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 SH3TC2Q8TF17 1288 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 ACSS3Q9H6R3 686 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 SPATS2LQ9NUQ6 558 aaKnown RBP17.27■□□□□ 0.35
LIG1-206ENST00000594067 XPO7Q9UIA9 1087 aaKnown RBP17.27■□□□□ 0.35
LIG1-206ENST00000594067 ZNF112Q9UJU3 913 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 CPSF3Q9UKF6 684 aaKnown RBP17.27■□□□□ 0.35
LIG1-206ENST00000594067 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.35
LIG1-206ENST00000594067 KRT19P08727 400 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 HOXC6P09630 235 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 POLR2BP30876 1174 aaKnown RBP17.26■□□□□ 0.35
LIG1-206ENST00000594067 BASP1P80723 227 aaKnown RBP17.26■□□□□ 0.35
LIG1-206ENST00000594067 GRM1Q13255 1194 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 EEPD1Q7L9B9 569 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 CEP120Q8N960 986 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 KCTD6Q8NC69 237 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 MZB1Q8WU39 189 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 HSPH1Q92598 858 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 CPXM1Q96SM3 734 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 SYNCQ9H7C4 482 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 ZFP69BQ9UJL9 534 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 RPL26L1Q9UNX3 145 aaKnown RBP17.26■□□□□ 0.35
LIG1-206ENST00000594067 CHMP2BQ9UQN3 213 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 SIP14410 1827 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 TCF7P36402 384 aaPredicted RBP17.26■□□□□ 0.35
LIG1-206ENST00000594067 YWHAEP62258 255 aaKnown RBP17.26■□□□□ 0.35
LIG1-206ENST00000594067 KLHL38Q2WGJ6 581 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 FYB2Q5VWT5 728 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 MTDHQ86UE4 582 aaKnown RBP17.26■□□□□ 0.35
LIG1-206ENST00000594067 TTC13Q8NBP0 860 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 RFWD2Q8NHY2 731 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 DCAKDQ8WVC6 231 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 LNPEPQ9UIQ6 1025 aa17.26■□□□□ 0.35
LIG1-206ENST00000594067 C19orf81C9J6K1 198 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 ABLIM1O14639 778 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 EFNA5P52803 228 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 EIF3EP60228 445 aaKnown RBP17.25■□□□□ 0.35
LIG1-206ENST00000594067 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 CLNKQ7Z7G1 428 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 MIPEPQ99797 713 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 DHRS4Q9BTZ2 278 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 DCLRE1BQ9H816 532 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 SSU72Q9NP77 194 aaKnown RBP17.25■□□□□ 0.35
LIG1-206ENST00000594067 EFR3BQ9Y2G0 817 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 PDHA1P08559 390 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 TUBP50607 506 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 IGDCC3Q8IVU1 814 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 LMNTD2Q8IXW0 634 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 PDIK1LQ8N165 341 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 ZNF276Q8N554 614 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 DNERQ8NFT8 737 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 CALN1Q9BXU9 219 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 SAR1AQ9NR31 198 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 HOXC10Q9NYD6 342 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 KANSL3Q9P2N6 904 aa17.25■□□□□ 0.35
LIG1-206ENST00000594067 E7ESA3 106 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 ERBB2P04626 1255 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 ACADSP16219 412 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 MRPS35P82673 323 aaKnown RBP17.24■□□□□ 0.35
LIG1-206ENST00000594067 KHDC1Q4VXA5 237 aaKnown RBP17.24■□□□□ 0.35
LIG1-206ENST00000594067 FAM160B1Q5W0V3 765 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 NPNTQ6UXI9 565 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 C4orf50Q6ZRC1 276 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 TRIM50Q86XT4 487 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 XYLT1Q86Y38 959 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 BANPQ8N9N5 519 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 FBXO41Q8TF61 875 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 PTPRN2Q92932 1015 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 SYT15Q9BQS2 421 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 TNNC2P02585 160 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 GJB1P08034 283 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 RBP3P10745 1247 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 MIPP30301 263 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 PRKG1Q13976 671 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 TMEM132AQ24JP5 1023 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 RFWD3Q6PCD5 774 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 ZBTB8OSQ8IWT0 167 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 SPDYE1Q8NFV5 336 aaPredicted RBP17.24■□□□□ 0.35
LIG1-206ENST00000594067 DNAJC9Q8WXX5 260 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms