RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 NFATC1O95644 943 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 ANXA13P27216 316 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 GBP1P32455 592 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 DGKEP52429 567 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 CYP27A1Q02318 531 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 CREB5Q02930 508 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 DNM1Q05193 864 aaKnown RBP15.76■□□□□ 0.11
PNKP-202ENST00000593706 SOWAHAQ2M3V2 549 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 EML3Q32P44 896 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 PLA2G2CQ5R387 149 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 RNF43Q68DV7 783 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 CNNM4Q6P4Q7 775 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 STXBP4Q6ZWJ1 553 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 PDILTQ8N807 584 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 CXorf38Q8TB03 319 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 MYLPFQ96A32 169 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 HPDLQ96IR7 371 aa15.76■□□□□ 0.11
PNKP-202ENST00000593706 MAGEC2Q9UBF1 373 aaPredicted RBP15.76■□□□□ 0.11
PNKP-202ENST00000593706 GON4LQ3T8J9 2241 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 ASCC3Q8N3C0 2202 aaKnown RBP15.75■□□□□ 0.11
PNKP-202ENST00000593706 PTPRJQ12913 1337 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 GABRDO14764 452 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 ATP2C2O75185 946 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 PRPF6O94906 941 aaKnown RBP15.75■□□□□ 0.11
PNKP-202ENST00000593706 HDCP19113 662 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 GRIK1P39086 918 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 MAGEA11P43364 429 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 MAPRE1Q15691 268 aaKnown RBP15.75■□□□□ 0.11
PNKP-202ENST00000593706 FOXD4L6Q3SYB3 417 aaPredicted RBP15.75■□□□□ 0.11
PNKP-202ENST00000593706 SCARA3Q6AZY7 606 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 TCEAL6Q6IPX3 200 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 FOXD4L3Q6VB84 417 aaPredicted RBP15.75■□□□□ 0.11
PNKP-202ENST00000593706 DPH6Q7L8W6 267 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 CCDC65Q8IXS2 484 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 TSTD1Q8NFU3 115 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 CCDC26Q8TAB7 109 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 TCEAL3Q969E4 200 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 EDEM2Q9BV94 578 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 DUSP15Q9H1R2 295 aaPredicted RBP15.75■□□□□ 0.11
PNKP-202ENST00000593706 TNMDQ9H2S6 317 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 CUEDC2Q9H467 287 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 INTS13Q9NVM9 706 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 TRPM5Q9NZQ8 1165 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 GCNT4Q9P109 453 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 RCOR1Q9UKL0 485 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 CDH9Q9ULB4 789 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 PCDHA7Q9UN72 937 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 ARHGAP26Q9UNA1 814 aa15.75■□□□□ 0.11
PNKP-202ENST00000593706 IGF2RP11717 2491 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 DCLK1O15075 740 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 KIAA0391O15091 583 aaKnown RBP15.74■□□□□ 0.11
PNKP-202ENST00000593706 BDNFP23560 247 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 SEC13P55735 322 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 SURF1Q15526 300 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 N4BP2L1Q5TBK1 243 aaPredicted RBP15.74■□□□□ 0.11
PNKP-202ENST00000593706 RESP18Q5W5W9 173 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 VSTM1Q6UX27 236 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 DENND5BQ6ZUT9 1274 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 OR5B17Q8NGF7 314 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 EZH1Q92800 747 aaPredicted RBP15.74■□□□□ 0.11
PNKP-202ENST00000593706 MMS19Q96T76 1030 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 TPSD1Q9BZJ3 242 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 TRIM9Q9C026 710 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 EHD2Q9NZN4 543 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 EBF1Q9UH73 591 aa15.74■□□□□ 0.11
PNKP-202ENST00000593706 FAM208BQ5VWN6 2430 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 ZNF233A6NK53 670 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 TRIM66O15016 1216 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 CAVIN2O95810 425 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 EHHADHQ08426 723 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 DUOXA2Q1HG44 320 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 C2orf27AQ580R0 203 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 FAM171BQ6P995 826 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 TTC30AQ86WT1 665 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 CBWD2Q8IUF1 395 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 KBTBD7Q8WVZ9 684 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 SPATA17Q96L03 361 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 CRTAC1Q9NQ79 661 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 AKAP13Q12802 2813 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 ZZEF1O43149 2961 aa15.73■□□□□ 0.11
PNKP-202ENST00000593706 LEFTY2O00292 366 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 TM4SF5O14894 197 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 CLSTN1O94985 981 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 ABL1P00519 1130 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 PDGFRBP09619 1106 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 TCF3P15923 654 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 LMO2P25791 158 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 PMLP29590 882 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 ME1P48163 572 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 USP46P62068 366 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 USP39Q53GS9 565 aaKnown RBP15.72■□□□□ 0.11
PNKP-202ENST00000593706 MDH1BQ5I0G3 518 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 ANO7Q6IWH7 933 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 PSAPL1Q6NUJ1 521 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 HS2ST1Q7LGA3 356 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 C11orf74Q86VG3 221 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 WDR49Q8IV35 697 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 IQUBQ8NA54 791 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 GLIS3Q8NEA6 775 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 DHX58Q96C10 678 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms