RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 F8VP50 259 aa17.21■□□□□ 0.35
CIRBP-241ENST00000593048 KLRC4O43908 158 aa17.21■□□□□ 0.35
CIRBP-241ENST00000593048 ABL1P00519 1130 aa17.21■□□□□ 0.35
CIRBP-241ENST00000593048 SIM2Q14190 667 aaPredicted RBP17.21■□□□□ 0.35
CIRBP-241ENST00000593048 LONP2Q86WA8 852 aa17.21■□□□□ 0.35
CIRBP-241ENST00000593048 OSCP1Q8WVF1 389 aa17.21■□□□□ 0.35
CIRBP-241ENST00000593048 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.35
CIRBP-241ENST00000593048 USP18Q9UMW8 372 aa17.21■□□□□ 0.35
CIRBP-241ENST00000593048 OTOL1A6NHN0 477 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-241ENST00000593048 TRDMT1O14717 391 aaKnown RBP17.2■□□□□ 0.34
CIRBP-241ENST00000593048 ATG13O75143 517 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 PAPSS2O95340 614 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-241ENST00000593048 STAU1O95793 577 aaKnown RBP17.2■□□□□ 0.34
CIRBP-241ENST00000593048 MYL1P05976 194 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 CNR2P34972 360 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 DMWDQ09019 674 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 IFRD2Q12894 506 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-241ENST00000593048 NR1H3Q13133 447 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 ZNF77Q15935 545 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 ZNF699Q32M78 642 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 ZNF667Q5HYK9 610 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 TMEM196Q5HYL7 178 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 TDRD10Q5VZ19 366 aaKnown RBP17.2■□□□□ 0.34
CIRBP-241ENST00000593048 KIAA0895Q8NCT3 520 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 RIN3Q8TB24 985 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 SH3RF2Q8TEC5 729 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 PARD3BQ8TEW8 1205 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 ATP2A3Q93084 1043 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 ELOVL4Q9GZR5 314 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 DPEP3Q9H4B8 488 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 ECT2Q9H8V3 914 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 WNT6Q9Y6F9 365 aa17.2■□□□□ 0.34
CIRBP-241ENST00000593048 NCOR2Q9Y618 2525 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 MED19A0JLT2 244 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-241ENST00000593048 LRRIQ3A6PVS8 624 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-241ENST00000593048 K7ESF4 209 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 PDXKO00764 312 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 KIF20AO95235 890 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 DRD1P21728 446 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 GJA4P35212 333 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 SYKP43405 635 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 PPP3CCP48454 512 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 GALK1P51570 392 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 USP46P62068 366 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 NCOA4Q13772 614 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.34
CIRBP-241ENST00000593048 CEP135Q66GS9 1140 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 LAIR1Q6GTX8 287 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 FSTL4Q6MZW2 842 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 CEP68Q76N32 757 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 DGLUCYQ7Z3D6 616 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 B3GALNT2Q8NCR0 500 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 SLITRK1Q96PX8 696 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 P2RY13Q9BPV8 354 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 GZF1Q9H116 711 aaPredicted RBP17.19■□□□□ 0.34
CIRBP-241ENST00000593048 XYLT2Q9H1B5 865 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 C2orf42Q9NWW7 574 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 GCNT4Q9P109 453 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 SLC8A2Q9UPR5 921 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 FRMD4BQ9Y2L6 1034 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 NME7Q9Y5B8 376 aa17.19■□□□□ 0.34
CIRBP-241ENST00000593048 CLDN5O00501 218 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 HRO43593 1189 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 CALUO43852 315 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-241ENST00000593048 MBD3O95983 291 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 EGFP01133 1207 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 NR3C1P04150 777 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 RPN1P04843 607 aaKnown RBP17.18■□□□□ 0.34
CIRBP-241ENST00000593048 P4HA1P13674 534 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 PFKLP17858 780 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 CDH8P55286 799 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 NOP14P78316 857 aaKnown RBP17.18■□□□□ 0.34
CIRBP-241ENST00000593048 USP4Q13107 963 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 RSPO4Q2I0M5 234 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-241ENST00000593048 KLHL40Q2TBA0 621 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 SCARA5Q6ZMJ2 495 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
CIRBP-241ENST00000593048 SLC9A9Q8IVB4 645 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 PLEKHO2Q8TD55 490 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 CHFRQ96EP1 664 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 TNIP3Q96KP6 325 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 TTLL2Q9BWV7 592 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 B3GNT5Q9BYG0 378 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 SMYD3Q9H7B4 428 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 VRTNQ9H8Y1 702 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 DMAC2Q9NW81 257 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 ARHGAP26Q9UNA1 814 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 ATP8B3O60423 1300 aa17.18■□□□□ 0.34
CIRBP-241ENST00000593048 ZNF840PA6NDX5 716 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 RNF40O75150 1001 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 C4BPAP04003 597 aaKnown RBP17.17■□□□□ 0.34
CIRBP-241ENST00000593048 SDHBP21912 280 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 RAP1GAPP47736 663 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 SPEM2Q0P670 501 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 TAF10Q12962 218 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 SRSF5Q13243 272 aaKnown RBP17.17■□□□□ 0.34
CIRBP-241ENST00000593048 EML3Q32P44 896 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms