RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TAF6P49848 677 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 KPNA1P52294 538 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 ZNF280DQ6N043 979 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 METTL7BQ6UX53 244 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 AGR3Q8TD06 166 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 TARS2Q9BW92 718 aaKnown RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 NSMCE4AQ9NXX6 385 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 ARHGDIAP52565 204 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 STARD3Q14849 445 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 SMAD1Q15797 465 aaKnown RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 APLFQ8IW19 511 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-228ENST00000592705 TRPM4Q8TD43 1214 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 CSGALNACT1Q8TDX6 532 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 ZNF518BQ9C0D4 1074 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 PCDHGC5Q9Y5F6 944 aa13.23□□□□□ -0.29
DNMT1-228ENST00000592705 ZSCAN5CA6NGD5 496 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-228ENST00000592705 IRF1P10914 325 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 IL10P22301 178 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 ACADSBP45954 432 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 CLEC16AQ2KHT3 1053 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 BOLA3Q53S33 107 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 TFDP3Q5H9I0 405 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 NLRP9Q7RTR0 991 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 PRPF39Q86UA1 669 aaKnown RBP13.22□□□□□ -0.29
DNMT1-228ENST00000592705 NCLNQ969V3 563 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 PBXIP1Q96AQ6 731 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 TINF2Q9BSI4 451 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 RIPK2O43353 540 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 POLBP06746 335 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 ACADSP16219 412 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 CHI3L2Q15782 390 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 LRRC8EQ6NSJ5 796 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 MTMR9Q96QG7 549 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 STN1Q9H668 368 aaKnown RBP13.22□□□□□ -0.29
DNMT1-228ENST00000592705 ABI2Q9NYB9 513 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-228ENST00000592705 TRIM49D1C9J1S8 452 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 HMBSP08397 361 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 ZBTB48P10074 688 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-228ENST00000592705 NPTX2P47972 431 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 PSMC6P62333 389 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 OCA2Q04671 838 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 PDK1Q15118 436 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 PREPLQ4J6C6 727 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-228ENST00000592705 TMTC4Q5T4D3 741 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 SLC24A2Q9UI40 661 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 MFSD10Q14728 455 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 HABP4Q5JVS0 413 aaKnown RBP13.22□□□□□ -0.29
DNMT1-228ENST00000592705 FIBCD1Q8N539 461 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 CD99L2Q8TCZ2 262 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 IDI2Q9BXS1 227 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 CDY2AQ9Y6F7 541 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 CDY1Q9Y6F8 540 aa13.22□□□□□ -0.29
DNMT1-228ENST00000592705 EFCAB14O75071 495 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 TM4SF1P30408 202 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 KIZQ2M2Z5 673 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 CTXN3Q4LDR2 81 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SLC47A2Q86VL8 602 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 OR6P1Q8NGX9 317 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SEMA4AQ9H3S1 761 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 DFFAO00273 331 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SYNCRIPO60506 623 aaKnown RBP13.21□□□□□ -0.29
DNMT1-228ENST00000592705 E2F6O75461 281 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 MYL2P10916 166 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 CD302Q8IX05 232 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 GPRC5CQ9NQ84 441 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SNX5Q9Y5X3 404 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SOCS7O14512 581 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 KLRC4O43908 158 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SYF2O95926 243 aaKnown RBP13.21□□□□□ -0.29
DNMT1-228ENST00000592705 RRM1P23921 792 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 CTNNB1P35222 781 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 CYP24A1Q07973 514 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 PLD1Q13393 1074 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 SETD3Q86TU7 594 aaPredicted RBP13.21□□□□□ -0.29
DNMT1-228ENST00000592705 RNF135Q8IUD6 432 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 RXFP1Q9HBX9 757 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 TRPM5Q9NZQ8 1165 aa13.21□□□□□ -0.29
DNMT1-228ENST00000592705 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.29
DNMT1-228ENST00000592705 ATRNO75882 1429 aa13.21□□□□□ -0.3
DNMT1-228ENST00000592705 EEF2KO00418 725 aaKnown RBP13.21□□□□□ -0.3
DNMT1-228ENST00000592705 DDX3XO00571 662 aaKnown RBP eCLIP13.21□□□□□ -0.38e-9■■□□□ 12.4
DNMT1-228ENST00000592705 PSEN2P49810 448 aa13.21□□□□□ -0.3
DNMT1-228ENST00000592705 C4orf19Q8IY42 314 aa13.21□□□□□ -0.3
DNMT1-228ENST00000592705 TSEN2Q8NCE0 465 aaKnown RBP13.21□□□□□ -0.3
DNMT1-228ENST00000592705 FBXO36Q8NEA4 188 aa13.21□□□□□ -0.3
DNMT1-228ENST00000592705 DTNBP1Q96EV8 351 aa13.21□□□□□ -0.3
DNMT1-228ENST00000592705 MRPL1Q9BYD6 325 aaKnown RBP13.21□□□□□ -0.3
DNMT1-228ENST00000592705 CRYMQ14894 314 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 MIIPQ5JXC2 388 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 ATXN2LQ8WWM7 1075 aaKnown RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 GFM2Q969S9 779 aaKnown RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 PGM2Q96G03 612 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 FAM111AQ96PZ2 611 aa13.2□□□□□ -0.3
DNMT1-228ENST00000592705 UBE2OQ9C0C9 1292 aaKnown RBP13.2□□□□□ -0.3
DNMT1-228ENST00000592705 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms