RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 DMDP11532 3685 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 KINO60870 393 aaKnown RBP10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 CKMP06732 381 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 KRT13P13646 458 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 TCF3P15923 654 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 PSMC2P35998 433 aaKnown RBP10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 CXCL12P48061 93 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 CCR3P51677 355 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 USP46P62068 366 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 CCINQ13939 588 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 GAS6Q14393 721 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 EDRF1Q3B7T1 1238 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 ZCWPW2Q504Y3 356 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 TXNDC11Q6PKC3 985 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 UNC93AQ86WB7 457 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 FAM186BQ8IYM0 893 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 SPEM1Q8N4L4 309 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 KIAA1958Q8N8K9 716 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 ARL14EPQ8N8R7 260 aaPredicted RBP10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 ENGASEQ8NFI3 743 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 TTC8Q8TAM2 541 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 SPATA20Q8TB22 786 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 RIN3Q8TB24 985 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 SLC22A12Q96S37 553 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 GTPBP4Q9BZE4 634 aaKnown RBP10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 ZNF518BQ9C0D4 1074 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 EBF3Q9H4W6 596 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 SMYD3Q9H7B4 428 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 TRPC7Q9HCX4 862 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 HPS4Q9NQG7 708 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 TMEM30AQ9NV96 361 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 ARHGAP26Q9UNA1 814 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 COL4A2P08572 1712 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 ATP8B3O60423 1300 aa10.32□□□□□ -0.76
PRKCSH-215ENST00000592435 C2orf78A6NCI8 922 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 ZNF840PA6NDX5 716 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 OTOL1A6NHN0 477 aaPredicted RBP10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 CLDN5O00501 218 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 TRDMT1O14717 391 aaKnown RBP10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 LILRB5O75023 590 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 RTN3O95197 1032 aaPredicted RBP10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 HLA-DRAP01903 254 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 TDGF1P13385 188 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 GTF2H1P32780 548 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 RAP1GAPP47736 663 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 CACNA2D1P54289 1103 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 PPP3CAQ08209 521 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 PNOCQ13519 176 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 MTF1Q14872 753 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 PON2Q15165 354 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 ZNF77Q15935 545 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 COBLL1Q53SF7 1204 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 TMEM196Q5HYL7 178 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 WDR44Q5JSH3 913 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 ZNF658Q5TYW1 1059 aaPredicted RBP10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 PAQR9Q6ZVX9 377 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 ACOT1Q86TX2 421 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 ELOA2Q8IYF1 753 aaPredicted RBP10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 NUP93Q8N1F7 819 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 SUMF1Q8NBK3 374 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 SH3RF2Q8TEC5 729 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 OSCP1Q8WVF1 389 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 OVCA2Q8WZ82 227 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 EXOC4Q96A65 974 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 FAXDC2Q96IV6 333 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 TIGD1Q96MW7 591 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 KCNK16Q96T55 309 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 IMPG2Q9BZV3 1241 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 SDCBP2Q9H190 292 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 CYP3A43Q9HB55 503 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 COMMD8Q9NX08 183 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 IL37Q9NZH6 218 aa10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 HOOK1Q9UJC3 728 aaKnown RBP10.31□□□□□ -0.76
PRKCSH-215ENST00000592435 CFAP54Q96N23 3096 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 NUP210Q8TEM1 1887 aaPredicted RBP10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 TNFRSF10BO14763 440 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 CLSTN1O94985 981 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 PAPSS2O95340 614 aaPredicted RBP10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 SMC2O95347 1197 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 OLFM2O95897 454 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 ARSAP15289 507 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 TRIM21P19474 475 aaKnown RBP10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 YWHAQP27348 245 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 HOXA6P31267 233 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 PIK3CAP42336 1068 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 PRCPP42785 496 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 ASPAP45381 313 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 GCLMP48507 274 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 NDST1P52848 882 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 SLC7A9P82251 487 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 GRSF1Q12849 480 aaKnown RBP eCLIP10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 TAF10Q12962 218 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 USP4Q13107 963 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 NR1H3Q13133 447 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 SNX30Q5VWJ9 437 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 TRIM68Q6AZZ1 485 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 TSSK4Q6SA08 328 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 SCARA5Q6ZMJ2 495 aa10.3□□□□□ -0.76
PRKCSH-215ENST00000592435 FAM35AQ86V20 835 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms