RNA–Protein interactions for RNA: ENST00000591579.5

NEDD4L-232, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 144 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-232ENST00000591579 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 SOWAHAQ2M3V2 549 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 SFTPA1Q8IWL2 248 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 TMEFF1Q8IYR6 380 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 KDF1Q8NAX2 398 aaPredicted RBP13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 TXNDC5Q8NBS9 432 aaKnown RBP13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 CXorf38Q8TB03 319 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 SPATA18Q8TC71 538 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 WHAMMQ8TF30 809 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 ZCCHC14Q8WYQ9 949 aaKnown RBP13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 EPSTI1Q96J88 318 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 TMX3Q96JJ7 454 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 CBWD1Q9BRT8 395 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 PCIF1Q9H4Z3 704 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 GDAP2Q9NXN4 497 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 TRPM5Q9NZQ8 1165 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 MAGEC2Q9UBF1 373 aaPredicted RBP13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 SEL1LQ9UBV2 794 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 SIX4Q9UIU6 781 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 WASF3Q9UPY6 502 aa13.96□□□□□ -0.17
NEDD4L-232ENST00000591579 ANK1P16157 1881 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 TMEM8BA6NDV4 472 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 MYMKA6NI61 221 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 GABRDO14764 452 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 LDHAP00338 332 aaKnown RBP13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 IDEP14735 1019 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 HNRNPLP14866 589 aaKnown RBP eCLIP13.95□□□□□ -0.181e-13■□□□□ 10.7
NEDD4L-232ENST00000591579 TCF3P15923 654 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 GAP43P17677 238 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 TIE1P35590 1138 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 PTGER3P43115 390 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 LMAN2Q12907 356 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 RESTQ13127 1097 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 RABEP1Q15276 862 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 GAB4Q2WGN9 574 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 TMEM92Q6UXU6 159 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 USP49Q70CQ1 688 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 HMGB4Q8WW32 186 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 HPDLQ96IR7 371 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 SPATA17Q96L03 361 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 NUSAP1Q9BXS6 441 aaKnown RBP13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 ZDHHC4Q9NPG8 344 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 CCDC39Q9UFE4 941 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 CDH9Q9ULB4 789 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 SMC3Q9UQE7 1217 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 CPQQ9Y646 472 aa13.95□□□□□ -0.18
NEDD4L-232ENST00000591579 EML5Q05BV3 1969 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 PTPRJQ12913 1337 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 ATG2BQ96BY7 2078 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 TCRBV21S2A2A0A5A6 115 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 SGK1O00141 431 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 HYAL3O43820 417 aaPredicted RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 OBSL1O75147 1896 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 TNNC2P02585 160 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 APODP05090 189 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 CFIP05156 583 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 PDGFRBP09619 1106 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 ENGP17813 658 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 GARTP22102 1010 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 LMO2P25791 158 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 P2RY2P41231 377 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 SLC6A11P48066 632 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 MRPS21P82921 87 aaKnown RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 MESP2Q0VG99 397 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 IFRD2Q12894 506 aaPredicted RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 DHCR24Q15392 516 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 MAPRE1Q15691 268 aaKnown RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 LYSMD4Q5XG99 296 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 LARP1BQ659C4 914 aaKnown RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 FAM171BQ6P995 826 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 VSTM1Q6UX27 236 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 DENND5BQ6ZUT9 1274 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 BRAPQ7Z569 592 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 C12orf40Q86WS4 652 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 PGBD3Q8N328 593 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 FRMD1Q8N878 549 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 IL17RCQ8NAC3 791 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 OLIG1Q8TAK6 271 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 KBTBD7Q8WVZ9 684 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 GATA6Q92908 595 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 ANKRD36BP1Q96IX9 119 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 FNBP1Q96RU3 617 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 PNKPQ96T60 521 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 MMS19Q96T76 1030 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 STRA6Q9BX79 667 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 FGFBP2Q9BYJ0 223 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 SLC32A1Q9H598 525 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 POLMQ9NP87 494 aaPredicted RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 CRTAC1Q9NQ79 661 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 ARHGEF4Q9NR80 690 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 EVLQ9UI08 416 aaPredicted RBP13.94□□□□□ -0.18
NEDD4L-232ENST00000591579 LAMA1P25391 3075 aa13.93□□□□□ -0.18
NEDD4L-232ENST00000591579 SPAARA0A1B0GVQ0 90 aa13.93□□□□□ -0.18
NEDD4L-232ENST00000591579 ZNF840PA6NDX5 716 aa13.93□□□□□ -0.18
NEDD4L-232ENST00000591579 SLC9A3R1O14745 358 aaPredicted RBP13.93□□□□□ -0.18
NEDD4L-232ENST00000591579 TNFRSF10BO14763 440 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms