RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 PCDHGA5Q9Y5G8 931 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.14□□□□□ -0.79
BRCA1-226ENST00000591534 STYXL1Q9Y6J8 313 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 NOTCH4Q99466 2003 aa10.14□□□□□ -0.79
BRCA1-226ENST00000591534 CEP250Q9BV73 2442 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 DOCK6Q96HP0 2047 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 PATJQ8NI35 1801 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 TRDMT1O14717 391 aaKnown RBP10.13□□□□□ -0.79
BRCA1-226ENST00000591534 PPEF2O14830 753 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 HUS1O60921 280 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 PRPF40AO75400 957 aaKnown RBP10.13□□□□□ -0.79
BRCA1-226ENST00000591534 RPP40O75818 363 aaKnown RBP10.13□□□□□ -0.79
BRCA1-226ENST00000591534 SOAT2O75908 522 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 PRAMEF12O95522 483 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 GAP43P17677 238 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 PLCG1P19174 1290 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 PDE6CP51160 858 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 LIMK1P53667 647 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 CYP4F8P98187 520 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 MYL7Q01449 175 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 RESTQ13127 1097 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 ZNF268Q14587 947 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-226ENST00000591534 KARSQ15046 597 aaKnown RBP10.13□□□□□ -0.79
BRCA1-226ENST00000591534 TXNDC11Q6PKC3 985 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 Q6ZS52 159 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 CPA6Q8N4T0 437 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 SPATA18Q8TC71 538 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 GIPC2Q8TF65 315 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 GAB3Q8WWW8 586 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 CCDC34Q96HJ3 373 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 ACCSQ96QU6 501 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 FAM83CQ9BQN1 747 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 ACBD6Q9BR61 282 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 ABCB6Q9NP58 842 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 EHD2Q9NZN4 543 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 STK17AQ9UEE5 414 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 CLIC4Q9Y696 253 aa10.13□□□□□ -0.79
BRCA1-226ENST00000591534 COL4A3Q01955 1670 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 TTC24A2A3L6 582 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 GOLGA6L4A6NEF3 574 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 GDF9O60383 454 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 RHOBTB1O94844 696 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 F13A1P00488 732 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ZNF806P0C7X5 589 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ATF6P18850 670 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 PCSK1P29120 753 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 NMT1P30419 496 aaKnown RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 LHX1P48742 406 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 NLRP12P59046 1061 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 TFAMQ00059 246 aaKnown RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 TNK2Q07912 1038 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 DMWDQ09019 674 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ALCAMQ13740 583 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 SF3A1Q15459 793 aaKnown RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ELF2Q15723 593 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 TMEM196Q5HYL7 178 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 TBCELQ5QJ74 424 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 WSCD1Q658N2 575 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 STXBP4Q6ZWJ1 553 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 USP49Q70CQ1 688 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ZNF720Q7Z2F6 126 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 C11orf74Q86VG3 221 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 MON1AQ86VX9 555 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 SYCP3Q8IZU3 236 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 TTC9BQ8N6N2 239 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 LRRC52Q8N7C0 313 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 MAB21L3Q8N8X9 362 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 LEO1Q8WVC0 666 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ATP2A3Q93084 1043 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 SYAP1Q96A49 352 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ACDQ96AP0 544 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 ITPKCQ96DU7 683 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 LRRC3BQ96PB8 259 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 P2RY13Q9BPV8 354 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 MRPL44Q9H9J2 332 aaKnown RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 MAGED2Q9UNF1 606 aaPredicted RBP10.12□□□□□ -0.79
BRCA1-226ENST00000591534 MTMR6Q9Y217 621 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 F5P12259 2224 aa10.12□□□□□ -0.79
BRCA1-226ENST00000591534 NCOR2Q9Y618 2525 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 NCANO14594 1321 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 TRAV19A0A0A6YYK7 116 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 ANKRD63C9JTQ0 380 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 AXIN1O15169 862 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 EPN2O95208 641 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 MBD3O95983 291 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 F11P03951 625 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 USP17L7P0C7H9 530 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 IFNAR2P48551 515 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 RBP5P82980 135 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 FAM160A1Q05DH4 1040 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 MYO1EQ12965 1108 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 SRSF5Q13243 272 aaKnown RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 MAPRE1Q15691 268 aaKnown RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 ZC2HC1CQ53FD0 456 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 RRAGBQ5VZM2 374 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 SLC39A4Q6P5W5 647 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 C4orf50Q6ZRC1 276 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 SV2BQ7L1I2 683 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 CYP2U1Q7Z449 544 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms