RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 WHAMMQ8TF30 809 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 SPACA7Q96KW9 195 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 ZNF560Q96MR9 790 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 PILRBQ9UKJ0 227 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 AGO2Q9UKV8 859 aaKnown RBP18.58■□□□□ 0.56
RETREG3-210ENST00000590541 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.56
RETREG3-210ENST00000590541 NBEAQ8NFP9 2946 aa18.58■□□□□ 0.56
RETREG3-210ENST00000590541 ANKRD11Q6UB99 2663 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-210ENST00000590541 HELZP42694 1942 aaKnown RBP18.57■□□□□ 0.56
RETREG3-210ENST00000590541 H0Y626 953 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 TRIM16O95361 564 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 KLF8O95600 359 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-210ENST00000590541 CYP17A1P05093 508 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 ITPKAP23677 461 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 WNT7BP56706 349 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 POU5F1Q01860 360 aaKnown RBP18.57■□□□□ 0.56
RETREG3-210ENST00000590541 CFAP221Q4G0U5 840 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 SPDYCQ5MJ68 293 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 EMC10Q5UCC4 262 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 LYSMD4Q5XG99 296 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 SCARA3Q6AZY7 606 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 OSTM1Q86WC4 334 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 FSIP1Q8NA03 581 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 RASSF8Q8NHQ8 419 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 IKZF4Q9H2S9 585 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 ZSCAN16Q9H4T2 348 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-210ENST00000590541 MORC2Q9Y6X9 1032 aaPredicted RBP18.57■□□□□ 0.56
RETREG3-210ENST00000590541 CACNA1EQ15878 2313 aa18.57■□□□□ 0.56
RETREG3-210ENST00000590541 LEFTY2O00292 366 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 HCRTO43612 131 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 POLR2BP30876 1174 aaKnown RBP18.56■□□□□ 0.56
RETREG3-210ENST00000590541 TIE1P35590 1138 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 PNPLA4P41247 253 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 SLC6A11P48066 632 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 DHX8Q14562 1220 aaKnown RBP18.56■□□□□ 0.56
RETREG3-210ENST00000590541 SLFN12LQ6IEE8 588 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 NT5DC4Q86YG4 428 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 SCN4BQ8IWT1 228 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 ADGRG2Q8IZP9 1017 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 SNX21Q969T3 373 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 POLMQ9NP87 494 aaPredicted RBP18.56■□□□□ 0.56
RETREG3-210ENST00000590541 BLOC1S4Q9NUP1 217 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 GPSM3Q9Y4H4 160 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 ADAMTS20P59510 1910 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 PLXND1Q9Y4D7 1925 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 LAMA5O15230 3695 aa18.56■□□□□ 0.56
RETREG3-210ENST00000590541 FREM2Q5SZK8 3169 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 ADAM23O75077 832 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 CFIP05156 583 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 ADSSP30520 456 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 DPP6P42658 865 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 KIR2DL1P43626 348 aaPredicted RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 MYL7Q01449 175 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 DHCR24Q15392 516 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 HSF5Q4G112 596 aaPredicted RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 SOWAHCQ53LP3 525 aaPredicted RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 LMBRD2Q68DH5 695 aaPredicted RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 RAB44Q7Z6P3 723 aaPredicted RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 FILIP1Q7Z7B0 1213 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 C12orf40Q86WS4 652 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 SPATA2LQ8IUW3 424 aaPredicted RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 HDDC3Q8N4P3 179 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 C1orf127Q8N9H9 656 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 SPATA18Q8TC71 538 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 HMGB4Q8WW32 186 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 FUBP3Q96I24 572 aaKnown RBP eCLIP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 PNKPQ96T60 521 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 GTPBP2Q9BX10 602 aaKnown RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 ZHX3Q9H4I2 956 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 ZDHHC4Q9NPG8 344 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 CCDC39Q9UFE4 941 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 SLC6A14Q9UN76 642 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 SRPRBQ9Y5M8 271 aaKnown RBP18.55■□□□□ 0.56
RETREG3-210ENST00000590541 ADAMTS9Q9P2N4 1935 aa18.55■□□□□ 0.56
RETREG3-210ENST00000590541 PCDH15Q96QU1 1955 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 A0A0A0MRY4 1105 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 MYMKA6NI61 221 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 HUS1O60921 280 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 KAT7O95251 611 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 IL18RAPO95256 599 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 ITGB3P05106 788 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 HOXD12P35452 270 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 TXLNAP40222 546 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 PI4KAP42356 2102 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 RESTQ13127 1097 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 DUOXA1Q1HG43 343 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 EOGTQ5NDL2 527 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 C19orf48Q6RUI8 117 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 TMEM86AQ8N2M4 240 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 CXorf38Q8TB03 319 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 RAD54LQ92698 747 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 ST6GALNAC4Q9H4F1 302 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 CAPN10Q9HC96 672 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 STK17AQ9UEE5 414 aa18.54■□□□□ 0.56
RETREG3-210ENST00000590541 ITPR1Q14643 2758 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 TCRBV21S2A2A0A5A6 115 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 GABRDO14764 452 aa18.53■□□□□ 0.56
RETREG3-210ENST00000590541 STX6O43752 255 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms