RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 SHANK3Q9BYB0 1731 aa5.4□□□□□ -1.55
SAFB-208ENST00000590485 TNS2Q63HR2 1409 aa5.4□□□□□ -1.55
SAFB-208ENST00000590485 PAPPAQ13219 1627 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 RHPN2P1A8MT19 583 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 C1QTNF3-AMACRE9PGA6 284 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 FOXN3O00409 490 aaPredicted RBP5.39□□□□□ -1.55
SAFB-208ENST00000590485 BTN3A1O00481 513 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 DNAJB5O75953 348 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 KIF20AO95235 890 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 NDUFA10O95299 355 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 ABHD16AO95870 558 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 PEX11BO96011 259 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 ADRB1P08588 477 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 C1SP09871 688 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 LAG3P18627 525 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 DDX6P26196 483 aaKnown RBP eCLIP5.39□□□□□ -1.55
SAFB-208ENST00000590485 ARFIP2P53365 341 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 SUMO3P55854 103 aaPredicted RBP5.39□□□□□ -1.55
SAFB-208ENST00000590485 CXADRP78310 365 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 FAM189BP81408 668 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 SLC13A2Q13183 592 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 IFIT5Q13325 482 aaKnown RBP5.39□□□□□ -1.55
SAFB-208ENST00000590485 PREPLQ4J6C6 727 aaPredicted RBP5.39□□□□□ -1.55
SAFB-208ENST00000590485 TIGD2Q4W5G0 525 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 LRRC55Q6ZSA7 311 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 CLNKQ7Z7G1 428 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 FAM46DQ8NEK8 389 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 CACTINQ8WUQ7 758 aaKnown RBP5.39□□□□□ -1.55
SAFB-208ENST00000590485 MOGAT1Q96PD6 335 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 SACM1LQ9NTJ5 587 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 TFCP2L1Q9NZI6 479 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 CPNE7Q9UBL6 633 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 AGAP1Q9UPQ3 857 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 CORO2BQ9UQ03 480 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 TMX2Q9Y320 296 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 TTC21BQ7Z4L5 1316 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 CENPJQ9HC77 1338 aaPredicted RBP5.39□□□□□ -1.55
SAFB-208ENST00000590485 RGPD5Q99666 1765 aa5.39□□□□□ -1.55
SAFB-208ENST00000590485 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 TOR1BO14657 336 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 VPS4BO75351 444 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 MYL3P08590 195 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 KCNA2P16389 499 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 ZKSCAN1P17029 563 aaPredicted RBP5.38□□□□□ -1.55
SAFB-208ENST00000590485 PTGS2P35354 604 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 SLC25A3Q00325 362 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 SATB1Q01826 763 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 TCF15Q12870 199 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 BEAN1Q3B7T3 259 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 IL31Q6EBC2 164 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 PPP1R32Q7Z5V6 425 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 MPP5Q8N3R9 675 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 TMEM132CQ8N3T6 1108 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 PSD4Q8NDX1 1056 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 CPEB3Q8NE35 698 aaKnown RBP5.38□□□□□ -1.55
SAFB-208ENST00000590485 ALOXE3Q9BYJ1 711 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 DPH1Q9BZG8 443 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 ZNF518BQ9C0D4 1074 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 GALNT9Q9HCQ5 603 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 PNPLA8Q9NP80 782 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 HESX1Q9UBX0 185 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 MAP3K2Q9Y2U5 619 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 REXO2Q9Y3B8 237 aaKnown RBP5.38□□□□□ -1.55
SAFB-208ENST00000590485 BTAF1O14981 1849 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 TTC21AQ8NDW8 1320 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 RAB3GAP2Q9H2M9 1393 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 ATP10DQ9P241 1426 aa5.38□□□□□ -1.55
SAFB-208ENST00000590485 TRPM1Q7Z4N2 1603 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 PIK3C2AO00443 1686 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 COL24A1Q17RW2 1714 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 QSER1Q2KHR3 1735 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 KIAA1210Q9ULL0 1709 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 CCDC78A2IDD5 438 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 MARCH11A6NNE9 402 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 SOAT2O75908 522 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 CDKL5O76039 1030 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 IFIT2P09913 472 aaKnown RBP5.37□□□□□ -1.55
SAFB-208ENST00000590485 SLC5A1P13866 664 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 CHRM3P20309 590 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 SLC11A2P49281 568 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 ANXA11P50995 505 aaKnown RBP5.37□□□□□ -1.55
SAFB-208ENST00000590485 NEK3P51956 506 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 UCP3P55916 312 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 FMO1Q01740 532 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 RESTQ13127 1097 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 TUBA3CQ13748 450 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 BRD3Q15059 726 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 LONRF1Q17RB8 773 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 LONRF3Q496Y0 759 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 B3GNTL1Q67FW5 361 aaPredicted RBP5.37□□□□□ -1.55
SAFB-208ENST00000590485 TUBA3EQ6PEY2 450 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 LAYNQ6UX15 382 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 SPRED1Q7Z699 444 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 COLGALT2Q8IYK4 626 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 DNAJC5GQ8N7S2 189 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 NSUN7Q8NE18 718 aaKnown RBP5.37□□□□□ -1.55
SAFB-208ENST00000590485 PHKBQ93100 1093 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 TMEM125Q96AQ2 219 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 MYEOVQ96EZ4 313 aa5.37□□□□□ -1.55
SAFB-208ENST00000590485 SPATA5L1Q9BVQ7 753 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms