RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX39A-213ENST00000590315 CNTN6Q9UQ52 1028 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 FAM50BQ9Y247 325 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 USP15Q9Y4E8 981 aaPredicted RBP13.61□□□□□ -0.23
DDX39A-213ENST00000590315 CEP83Q9Y592 693 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 ITIH6Q6UXX5 1313 aa13.61□□□□□ -0.23
DDX39A-213ENST00000590315 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 BEST1O76090 585 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 FERP16591 822 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 SP100P23497 879 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 CLCN1P35523 988 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 PBX1P40424 430 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 RGS7P49802 495 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 TRIM14Q14142 442 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 COL19A1Q14993 1142 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 AAK1Q2M2I8 961 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 PABPC1LQ4VXU2 614 aaKnown RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 TDRD12Q587J7 1177 aaKnown RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 CYP4A22Q5TCH4 519 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 SFMBT2Q5VUG0 894 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 PTCRAQ6ISU1 281 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 DENND5BQ6ZUT9 1274 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 TTC30AQ86WT1 665 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 FMNL3Q8IVF7 1028 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 VSTM4Q8IW00 320 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 HS6ST3Q8IZP7 471 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 SMRP1Q8NCR6 262 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 ZNF606Q8WXB4 792 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 SECISBP2LQ93073 1101 aaKnown RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 ZNF707Q96C28 371 aaPredicted RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 IQCDQ96DY2 449 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 C8orf48Q96LL4 319 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 SMOQ99835 787 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 ST7Q9NRC1 585 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 LUC7L2Q9Y383 392 aaKnown RBP13.6□□□□□ -0.23
DDX39A-213ENST00000590315 ASB3Q9Y575 518 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 CLUHO75153 1309 aa13.6□□□□□ -0.23
DDX39A-213ENST00000590315 DOCK8Q8NF50 2099 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 GRXCR2A6NFK2 248 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 PIK3R2O00459 728 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 MBTPS2O43462 519 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 ABL1P00519 1130 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 RHOP08100 348 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 SETSIPP0DME0 302 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 CYP11B1P15538 503 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 GABRR2P28476 465 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 CASP14P31944 242 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 PDE4CQ08493 712 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 CBX2Q14781 532 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-213ENST00000590315 CNGA2Q16280 664 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 TSR1Q2NL82 804 aaKnown RBP13.59□□□□□ -0.23
DDX39A-213ENST00000590315 LEXMQ3ZCV2 418 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 FIGNQ5HY92 759 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 DENND1BQ6P3S1 775 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 LCLAT1Q6UWP7 414 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 NUP93Q8N1F7 819 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 ANKRD52Q8NB46 1076 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 SLC20A1Q8WUM9 679 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 ING5Q8WYH8 240 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 PSMG2Q969U7 264 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 SPATA17Q96L03 361 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 NECTIN4Q96NY8 510 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 SLITRK6Q9H5Y7 841 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 LRRC4Q9HBW1 653 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 TMEM30AQ9NV96 361 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 EHD2Q9NZN4 543 aa13.59□□□□□ -0.23
DDX39A-213ENST00000590315 DNMT3BQ9UBC3 853 aaKnown RBP13.59□□□□□ -0.23
DDX39A-213ENST00000590315 UXTQ9UBK9 157 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-213ENST00000590315 MRPS23Q9Y3D9 190 aaKnown RBP13.59□□□□□ -0.23
DDX39A-213ENST00000590315 A0A1W2PQJ5 194 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 GOLGA6L6A8MZA4 724 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 XPO1O14980 1071 aaKnown RBP13.58□□□□□ -0.24
DDX39A-213ENST00000590315 RTN3O95197 1032 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-213ENST00000590315 ADCY5O95622 1261 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 GYPCP04921 128 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 MMEP08473 750 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 LCP1P13796 627 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 FSHRP23945 695 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 GBP2P32456 591 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-213ENST00000590315 SLC5A3P53794 718 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 CYP26C1Q6V0L0 522 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 NOP9Q86U38 636 aaKnown RBP13.58□□□□□ -0.24
DDX39A-213ENST00000590315 PIGZQ86VD9 579 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 SIX6OS1Q8N1H7 587 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 EPS8L1Q8TE68 723 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 BAP1Q92560 729 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 FBXO32Q969P5 355 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 MRFAP1L1Q96HT8 127 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 NOX5Q96PH1 765 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 ZSWIM1Q9BR11 485 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 EDEM3Q9BZQ6 932 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 TTYH3Q9C0H2 523 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 NUCKS1Q9H1E3 243 aaKnown RBP13.58□□□□□ -0.24
DDX39A-213ENST00000590315 S1PR5Q9H228 398 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 ATXN3LQ9H3M9 355 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 SYNCQ9H7C4 482 aa13.58□□□□□ -0.24
DDX39A-213ENST00000590315 ZNF334Q9HCZ1 680 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms