RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 SLC6A17Q9H1V8 727 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 C2orf40Q9H1Z8 148 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 TOPORSQ9NS56 1045 aaPredicted RBP6.6□□□□□ -1.35
VPS25-204ENST00000589577 HSPBP1Q9NZL4 362 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 GCNT4Q9P109 453 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 TNFSF13BQ9Y275 285 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.6□□□□□ -1.35
VPS25-204ENST00000589577 AK5Q9Y6K8 562 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 CELSR2Q9HCU4 2923 aa6.6□□□□□ -1.35
VPS25-204ENST00000589577 NUMA1Q14980 2115 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 NBASA2RRP1 2371 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 MYH10P35580 1976 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 CSMD1Q96PZ7 3565 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 ICE1Q9Y2F5 2266 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 C2orf78A6NCI8 922 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 K7ELQ4 463 aaPredicted RBP6.59□□□□□ -1.35
VPS25-204ENST00000589577 CBX4O00257 560 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 PPEF2O14830 753 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 NFATC1O95644 943 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 HAPLN1P10915 354 aaPredicted RBP6.59□□□□□ -1.35
VPS25-204ENST00000589577 GNSP15586 552 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 TCF3P15923 654 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 XBP1P17861 261 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 MARCKSP29966 332 aaPredicted RBP6.59□□□□□ -1.35
VPS25-204ENST00000589577 NAMPTP43490 491 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 YARSP54577 528 aaKnown RBP6.59□□□□□ -1.35
VPS25-204ENST00000589577 TMPRSS3P57727 454 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 KDSRQ06136 332 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 DMP1Q13316 513 aaPredicted RBP6.59□□□□□ -1.35
VPS25-204ENST00000589577 SLC10A6Q3KNW5 377 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 TBC1D25Q3MII6 688 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 SLC39A12Q504Y0 691 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 LRRTM3Q86VH5 581 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 FBXL16Q8N461 479 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 C1orf216Q8TAB5 229 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 SH3RF2Q8TEC5 729 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 LRRC15Q8TF66 581 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 TSC1Q92574 1164 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 ERLEC1Q96DZ1 483 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 ZNF274Q96GC6 653 aaPredicted RBP6.59□□□□□ -1.35
VPS25-204ENST00000589577 CCDC94Q9BW85 323 aaPredicted RBP6.59□□□□□ -1.35
VPS25-204ENST00000589577 ZCWPW1Q9H0M4 648 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 TMEM206Q9H813 350 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 SRPK3Q9UPE1 567 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 PLXNA2O75051 1894 aa6.59□□□□□ -1.35
VPS25-204ENST00000589577 ARID1BQ8NFD5 2236 aaPredicted RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 STK36Q9NRP7 1315 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 A0A1B0GVT2 93 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 CLEC18AA5D8T8 446 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 BTBD18B2RXH4 712 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SCAMP3O14828 347 aaKnown RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 ABCB7O75027 752 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 ZNF217O75362 1048 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 CKMP06732 381 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 HOXB2P14652 356 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 JUPP14923 745 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 CPA1P15085 419 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 TYMPP19971 482 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 PROZP22891 400 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 LRPAP1P30533 357 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 HNF1BP35680 557 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 EIF2DP41214 584 aaKnown RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 WASP42768 502 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 TUFMP49411 452 aaKnown RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 GUCY2FP51841 1108 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 NLRP5P59047 1200 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 HMGN5P82970 282 aaKnown RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 NFKB2Q00653 900 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SPAG1Q07617 926 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 NFATC3Q12968 1075 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 NR1H3Q13133 447 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 STK3Q13188 491 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 ZNF568Q3ZCX4 644 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SEZ6Q53EL9 994 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 WDR45BQ5MNZ6 344 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SYCP2LQ5T4T6 812 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 HES3Q5TGS1 186 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SDHAF4Q5VUM1 108 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 KIAA1614Q5VZ46 1190 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 PPP4R3AQ6IN85 833 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 FBXL19Q6PCT2 694 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 CLEC18BQ6UXF7 455 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 ZNF574Q6ZN55 896 aaPredicted RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 TAS1R3Q7RTX0 852 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 USP37Q86T82 979 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 BLIDQ8IZY5 108 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 ARL14EPQ8N8R7 260 aaPredicted RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 FAM184AQ8NB25 1140 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 CLEC18CQ8NCF0 446 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 MCPH1Q8NEM0 835 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 DEPTORQ8TB45 409 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 WASF1Q92558 559 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 MRPS31Q92665 395 aaKnown RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 FOXJ1Q92949 421 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 SNX21Q969T3 373 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 NAF1Q96HR8 494 aaKnown RBP6.58□□□□□ -1.36
VPS25-204ENST00000589577 HIC2Q96JB3 615 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 PNKPQ96T60 521 aa6.58□□□□□ -1.36
VPS25-204ENST00000589577 ACO2Q99798 780 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms