RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 C2orf42Q9NWW7 574 aa17.03■□□□□ 0.32
TMEM259-206ENST00000589055 HMGXB4Q9UGU5 601 aa17.03■□□□□ 0.32
TMEM259-206ENST00000589055 OTOGLQ3ZCN5 2332 aa17.03■□□□□ 0.32
TMEM259-206ENST00000589055 TPRP12270 2363 aaKnown RBP17.02■□□□□ 0.32
TMEM259-206ENST00000589055 CALUO43852 315 aaPredicted RBP17.02■□□□□ 0.32
TMEM259-206ENST00000589055 AKAP3O75969 853 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 CKMP06732 381 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 TDGF1P13385 188 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 NR2F2P24468 414 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 ANXA13P27216 316 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 PLCB2Q00722 1185 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 IFRD2Q12894 506 aaPredicted RBP17.02■□□□□ 0.32
TMEM259-206ENST00000589055 PNOCQ13519 176 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 MAPRE1Q15691 268 aaKnown RBP17.02■□□□□ 0.32
TMEM259-206ENST00000589055 ITPRIPL2Q3MIP1 535 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 ZNF667Q5HYK9 610 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 ZC3H14Q6PJT7 736 aaKnown RBP17.02■□□□□ 0.32
TMEM259-206ENST00000589055 VSTM1Q6UX27 236 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 DENND5BQ6ZUT9 1274 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 B3GALNT2Q8NCR0 500 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 SPATA17Q96L03 361 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 THG1LQ9NWX6 298 aaKnown RBP17.02■□□□□ 0.32
TMEM259-206ENST00000589055 GCNT4Q9P109 453 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 TRAF3IP3Q9Y228 551 aa17.02■□□□□ 0.32
TMEM259-206ENST00000589055 TRAV19A0A0A6YYK7 116 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 USP4Q13107 963 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 COL9A2Q14055 689 aaPredicted RBP17.01■□□□□ 0.31
TMEM259-206ENST00000589055 MTF1Q14872 753 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 ZNF77Q15935 545 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 ZNF528Q3MIS6 628 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 ZACNQ401N2 412 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 SV2AQ7L0J3 742 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 RALGPS2Q86X27 583 aaPredicted RBP17.01■□□□□ 0.31
TMEM259-206ENST00000589055 TMEM174Q8WUU8 243 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 ERCC4Q92889 916 aaPredicted RBP17.01■□□□□ 0.31
TMEM259-206ENST00000589055 EEF2KMTQ96G04 330 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 MMRN2Q9H8L6 949 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 VRTNQ9H8Y1 702 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 KIF9Q9HAQ2 790 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 ZMYM5Q9UJ78 669 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 WNT6Q9Y6F9 365 aa17.01■□□□□ 0.31
TMEM259-206ENST00000589055 HELZP42694 1942 aaKnown RBP17.01■□□□□ 0.31
TMEM259-206ENST00000589055 SCAMP3O14828 347 aaKnown RBP17■□□□□ 0.31
TMEM259-206ENST00000589055 TRIM66O15016 1216 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 KINO60870 393 aaKnown RBP17■□□□□ 0.31
TMEM259-206ENST00000589055 HLA-DRAP01903 254 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 USP17L7P0C7H9 530 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 PIK3CAP42336 1068 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 GCLMP48507 274 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 AP3M2P53677 418 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 MLLT6P55198 1093 aaPredicted RBP17■□□□□ 0.31
TMEM259-206ENST00000589055 ZXDBP98169 803 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 FAM160A1Q05DH4 1040 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 DMWDQ09019 674 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 RUNX3Q13761 415 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 BECN1Q14457 450 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 ZNF268Q14587 947 aaPredicted RBP17■□□□□ 0.31
TMEM259-206ENST00000589055 KCNB1Q14721 858 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 PAQR9Q6ZVX9 377 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 FAM35AQ86V20 835 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 GUF1Q8N442 669 aaKnown RBP17■□□□□ 0.31
TMEM259-206ENST00000589055 DCLK2Q8N568 766 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 SUMF1Q8NBK3 374 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 TMC2Q8TDI7 906 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 SH3RF2Q8TEC5 729 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 NELL1Q92832 810 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 CCDC47Q96A33 483 aaKnown RBP17■□□□□ 0.31
TMEM259-206ENST00000589055 MSANTD3Q96H12 275 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 C8orf48Q96LL4 319 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 KCNK16Q96T55 309 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 TTLL2Q9BWV7 592 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 ELOVL4Q9GZR5 314 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 FRMD4BQ9Y2L6 1034 aa17■□□□□ 0.31
TMEM259-206ENST00000589055 FAM163BP0C2L3 166 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 CCDC130P13994 396 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 ASPAP45381 313 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 VAMP7P51809 220 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 PPP3CAQ08209 521 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 CCINQ13939 588 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 LRRC32Q14392 662 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 RSPO4Q2I0M5 234 aaPredicted RBP16.99■□□□□ 0.31
TMEM259-206ENST00000589055 ZCWPW2Q504Y3 356 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 CC2D1AQ6P1N0 951 aaPredicted RBP16.99■□□□□ 0.31
TMEM259-206ENST00000589055 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 ACOT1Q86TX2 421 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 FMR1NBQ8N0W7 255 aaPredicted RBP16.99■□□□□ 0.31
TMEM259-206ENST00000589055 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 MED10Q9BTT4 135 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 APOBEC3GQ9HC16 384 aaKnown RBP16.99■□□□□ 0.31
TMEM259-206ENST00000589055 KRT82Q9NSB4 513 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 ZSCAN32Q9NX65 697 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 TRPM5Q9NZQ8 1165 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 CHD6Q8TD26 2715 aa16.99■□□□□ 0.31
TMEM259-206ENST00000589055 ZNF840PA6NDX5 716 aa16.98■□□□□ 0.31
TMEM259-206ENST00000589055 SOBPA7XYQ1 873 aa16.98■□□□□ 0.31
TMEM259-206ENST00000589055 ABL1P00519 1130 aa16.98■□□□□ 0.31
TMEM259-206ENST00000589055 ASS1P00966 412 aaKnown RBP16.98■□□□□ 0.31
TMEM259-206ENST00000589055 HDCP19113 662 aa16.98■□□□□ 0.31
TMEM259-206ENST00000589055 NDST1P52848 882 aa16.98■□□□□ 0.31
TMEM259-206ENST00000589055 NOP14P78316 857 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms