RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 TRIM66O15016 1216 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 ZMYND10O75800 440 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 CYP1A1P04798 512 aaPredicted RBP21.16■□□□□ 0.98
DNMT1-216ENST00000588952 SETSIPP0DME0 302 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 FOSL2P15408 326 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 CDH5P33151 784 aaPredicted RBP21.16■□□□□ 0.98
DNMT1-216ENST00000588952 EIF4A3P38919 411 aaKnown RBP21.16■□□□□ 0.98
DNMT1-216ENST00000588952 TUFMP49411 452 aaKnown RBP21.16■□□□□ 0.98
DNMT1-216ENST00000588952 RGS7P49802 495 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 NOMO3P69849 1222 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 ADAM15Q13444 863 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 MTMR3Q13615 1198 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 COL19A1Q14993 1142 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 PMF1Q6P1K2 205 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 TMEM184AQ6ZMB5 413 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 CCDC149Q6ZUS6 474 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 PIGZQ86VD9 579 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 TMEM139Q8IV31 216 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 C12orf76Q8N812 135 aaPredicted RBP21.16■□□□□ 0.98
DNMT1-216ENST00000588952 HDAC7Q8WUI4 952 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 ZNHIT6Q9NWK9 470 aaKnown RBP21.16■□□□□ 0.98
DNMT1-216ENST00000588952 MYH10P35580 1976 aa21.16■□□□□ 0.98
DNMT1-216ENST00000588952 TNFRSF10BO14763 440 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 CCL16O15467 120 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 PLA2G4AP47712 749 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 RPL10AP62906 217 aaKnown RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 CDK17Q00537 523 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 DLX2Q07687 328 aaPredicted RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 MAPK8IP2Q13387 824 aaPredicted RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 CLEC16AQ2KHT3 1053 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 CTC1Q2NKJ3 1217 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 TSR1Q2NL82 804 aaKnown RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 ASTE1Q2TB18 679 aaPredicted RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 PPM1LQ5SGD2 360 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 NAA35Q5VZE5 725 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 SLC30A5Q8TAD4 765 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 ANP32BQ92688 251 aaKnown RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 CASP10Q92851 521 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 PDCL3Q9H2J4 239 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 SEPT11Q9NVA2 429 aaKnown RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 TAS2R14Q9NYV8 317 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 TJP2Q9UDY2 1190 aa21.15■□□□□ 0.98
DNMT1-216ENST00000588952 BZW2Q9Y6E2 419 aaKnown RBP21.15■□□□□ 0.98
DNMT1-216ENST00000588952 PIK3R2O00459 728 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 TBX10O75333 385 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 UNGP13051 313 aaPredicted RBP21.14■□□□□ 0.97
DNMT1-216ENST00000588952 TNFAIP3P21580 790 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 ALDH1A3P47895 512 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 GSDMDP57764 484 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 USP46P62068 366 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 PDCLQ13371 301 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 CCDC85BQ15834 202 aaPredicted RBP21.14■□□□□ 0.97
DNMT1-216ENST00000588952 DNAAF5Q86Y56 855 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 CPA5Q8WXQ8 436 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 ZNF707Q96C28 371 aaPredicted RBP21.14■□□□□ 0.97
DNMT1-216ENST00000588952 SPATA17Q96L03 361 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 CLEC1BQ9P126 229 aa21.14■□□□□ 0.97
DNMT1-216ENST00000588952 A0A087X0T9 212 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 SLC38A8A6NNN8 435 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 GOLGA6L6A8MZA4 724 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 LSM8O95777 96 aaKnown RBP21.13■□□□□ 0.97
DNMT1-216ENST00000588952 FAM228BP0C875 321 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 ANXA13P27216 316 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 LTBRP36941 435 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 SLC5A3P53794 718 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 PTPN20Q4JDL3 420 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 ANKRD54Q6NXT1 300 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 SYCE2Q6PIF2 218 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 TRIM72Q6ZMU5 477 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 TMEM35BQ8NCS4 154 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 SCAMP5Q8TAC9 235 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 CPXM1Q96SM3 734 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 UBXN6Q9BZV1 441 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 NHEJ1Q9H9Q4 299 aaPredicted RBP21.13■□□□□ 0.97
DNMT1-216ENST00000588952 DZANK1Q9NVP4 752 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 CLDND1Q9NY35 253 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 ADAMTS1Q9UHI8 967 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 NENFQ9UMX5 172 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 GREB1Q4ZG55 1949 aa21.13■□□□□ 0.97
DNMT1-216ENST00000588952 SSU72P8A0A1W2PR75 194 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 SOWAHDA6NJG2 315 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 PAPLNO95428 1278 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 LRG1P02750 347 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 HMGA1P17096 107 aaKnown RBP21.12■□□□□ 0.97
DNMT1-216ENST00000588952 HOXA9P31269 272 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 RPL34P49207 117 aaKnown RBP21.12■□□□□ 0.97
DNMT1-216ENST00000588952 RAB41Q5JT25 222 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 RTL10Q7L3V2 364 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 KCTD13Q8WZ19 329 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.12■□□□□ 0.97
DNMT1-216ENST00000588952 APOL5Q9BWW9 433 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 SLC4A5Q9BY07 1137 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 SFXN1Q9H9B4 322 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 ZNF334Q9HCZ1 680 aaPredicted RBP21.12■□□□□ 0.97
DNMT1-216ENST00000588952 PNPLA8Q9NP80 782 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 HCFC1R1Q9NWW0 138 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 ZDHHC7Q9NXF8 308 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 CDH22Q9UJ99 828 aa21.12■□□□□ 0.97
DNMT1-216ENST00000588952 CCDC195A0A1B0GUA6 201 aa21.11■□□□□ 0.97
DNMT1-216ENST00000588952 NRG2O14511 850 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms