RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SYCP3Q8IZU3 236 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 TTC16Q8NEE8 873 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 EXOC4Q96A65 974 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 PCED1BQ96HM7 432 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 HPDLQ96IR7 371 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 EDEM2Q9BV94 578 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 PANK4Q9NVE7 773 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 THADAQ6YHU6 1953 aa19.7■□□□□ 0.74
CCDC43-204ENST00000588687 NFATC1O95644 943 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 CYP17A1P05093 508 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 HNRNPLP14866 589 aaKnown RBP eCLIP19.69■□□□□ 0.74
CCDC43-204ENST00000588687 PFKLP17858 780 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 HDCP19113 662 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 BDNFP23560 247 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 STAT6P42226 847 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 CACNA2D1P54289 1103 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 RNF43Q68DV7 783 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 SFTPA1Q8IWL2 248 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 HPS3Q969F9 1004 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 ANKRD36BP1Q96IX9 119 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 USP28Q96RU2 1077 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 FREM2Q5SZK8 3169 aa19.69■□□□□ 0.74
CCDC43-204ENST00000588687 ZNF840PA6NDX5 716 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 LEFTY2O00292 366 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 KIAA0391O15091 583 aaKnown RBP19.68■□□□□ 0.74
CCDC43-204ENST00000588687 RHOBTB1O94844 696 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 OAS1P00973 400 aaKnown RBP19.68■□□□□ 0.74
CCDC43-204ENST00000588687 BCKDHBP21953 392 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 NOP14P78316 857 aaKnown RBP19.68■□□□□ 0.74
CCDC43-204ENST00000588687 SLC7A9P82251 487 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 CREB5Q02930 508 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 CEBPZQ03701 1054 aaKnown RBP19.68■□□□□ 0.74
CCDC43-204ENST00000588687 MYO1EQ12965 1108 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 E2F4Q16254 413 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 DENND5BQ6ZUT9 1274 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 WDR49Q8IV35 697 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 KIAA1958Q8N8K9 716 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 MDGA1Q8NFP4 955 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 TSTD1Q8NFU3 115 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 MYCBPAPQ8TBZ2 947 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 CNOT6LQ96LI5 555 aaKnown RBP19.68■□□□□ 0.74
CCDC43-204ENST00000588687 TPSD1Q9BZJ3 242 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 RNF38Q9H0F5 515 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
CCDC43-204ENST00000588687 MAGEC2Q9UBF1 373 aaPredicted RBP19.68■□□□□ 0.74
CCDC43-204ENST00000588687 MMP17Q9ULZ9 603 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 WASF3Q9UPY6 502 aa19.68■□□□□ 0.74
CCDC43-204ENST00000588687 MYOFQ9NZM1 2061 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 CAVIN2O95810 425 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 PDCP20941 246 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 SYT1P21579 422 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 PDE6CP51160 858 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 DGKEP52429 567 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 PSMD2Q13200 908 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 SLC39A14Q15043 492 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 MAPRE1Q15691 268 aaKnown RBP19.67■□□□□ 0.74
CCDC43-204ENST00000588687 PSAPL1Q6NUJ1 521 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 EPM2AIP1Q7L775 607 aaPredicted RBP19.67■□□□□ 0.74
CCDC43-204ENST00000588687 OLIG1Q8TAK6 271 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 NOC3LQ8WTT2 800 aaKnown RBP19.67■□□□□ 0.74
CCDC43-204ENST00000588687 MRPL45Q9BRJ2 306 aaKnown RBP19.67■□□□□ 0.74
CCDC43-204ENST00000588687 PANK2Q9BZ23 570 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 HSPBP1Q9NZL4 362 aa19.67■□□□□ 0.74
CCDC43-204ENST00000588687 FAM208BQ5VWN6 2430 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 DMXL2Q8TDJ6 3036 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 ZNF233A6NK53 670 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 F8VP50 259 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 TULP1O00294 542 aaPredicted RBP19.66■□□□□ 0.74
CCDC43-204ENST00000588687 TNNC2P02585 160 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 SEC13P55735 322 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 NR1H3Q13133 447 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 CRY1Q16526 586 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 DUOXA2Q1HG44 320 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 C2orf27AQ580R0 203 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 ANO7Q6IWH7 933 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 TMEM92Q6UXU6 159 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 TRAPPC11Q7Z392 1133 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 FILIP1Q7Z7B0 1213 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 C12orf40Q86WS4 652 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 CHAMP1Q96JM3 812 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 C8orf48Q96LL4 319 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 TNMDQ9H2S6 317 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 KBTBD4Q9NVX7 518 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 TRPM5Q9NZQ8 1165 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 INVSQ9Y283 1065 aa19.66■□□□□ 0.74
CCDC43-204ENST00000588687 GIPC1O14908 333 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 TRIM66O15016 1216 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 TGFB1I1O43294 461 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 TACC1O75410 805 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 PDGFRBP09619 1106 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 GRIK1P39086 918 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 NASPP49321 788 aaPredicted RBP19.65■□□□□ 0.74
CCDC43-204ENST00000588687 CYP27A1Q02318 531 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 SURF1Q15526 300 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 MDH1BQ5I0G3 518 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 CCDC65Q8IXS2 484 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 ADGRG2Q8IZP9 1017 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 PHTF2Q8N3S3 785 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 PDILTQ8N807 584 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms