RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 ADAM9Q13443 819 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 RUNX3Q13761 415 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 EDRF1Q3B7T1 1238 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 FMR1NBQ8N0W7 255 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-219ENST00000588411 ADSSL1Q8N142 457 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 CCDC150Q8NCX0 1101 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 EXOC4Q96A65 974 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 SLITRK1Q96PX8 696 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 MED10Q9BTT4 135 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 B3GNT5Q9BYG0 378 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 GTPBP4Q9BZE4 634 aaKnown RBP23.2■■□□□ 1.3
CIRBP-219ENST00000588411 ZNF518BQ9C0D4 1074 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 ZSCAN32Q9NX65 697 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 USP34Q70CQ2 3546 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 ASS1P00966 412 aaKnown RBP23.19■■□□□ 1.3
CIRBP-219ENST00000588411 HLA-DRAP01903 254 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 HDCP19113 662 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 NRLP54845 237 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 PNOCQ13519 176 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 MTF1Q14872 753 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 TTC16Q8NEE8 873 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 DNAI2Q9GZS0 605 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 EBF3Q9H4W6 596 aa23.19■■□□□ 1.3
CIRBP-219ENST00000588411 PTPRZ1P23471 2315 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-219ENST00000588411 RTN3O95197 1032 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-219ENST00000588411 IFNAR2P48551 515 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 USP46P62068 366 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 PON2Q15165 354 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 TXNDC11Q6PKC3 985 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 UNC93AQ86WB7 457 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 SYNPOQ8N3V7 929 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 CPA6Q8N4T0 437 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 ARL14EPQ8N8R7 260 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-219ENST00000588411 SMARCD1Q96GM5 515 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 GSDMAQ96QA5 445 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 CYP2S1Q96SQ9 504 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 GCNT4Q9P109 453 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 ARHGAP26Q9UNA1 814 aa23.18■■□□□ 1.3
CIRBP-219ENST00000588411 VPS13AQ96RL7 3174 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 C2orf78A6NCI8 922 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 CLDN5O00501 218 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 CETN3O15182 167 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 EPB41P11171 864 aaKnown RBP23.17■■□□□ 1.3
CIRBP-219ENST00000588411 GTF2H1P32780 548 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 CXCL12P48061 93 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 GCLMP48507 274 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 USP4Q13107 963 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 ZNF77Q15935 545 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 ZCWPW2Q504Y3 356 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 C1orf220Q5T0J3 134 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 FAM35AQ86V20 835 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 NUP93Q8N1F7 819 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 SPEM1Q8N4L4 309 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 PDZD8Q8NEN9 1154 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 OSCP1Q8WVF1 389 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 ATP2A3Q93084 1043 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 SLC22A12Q96S37 553 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 TSG101Q99816 390 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 SDCBP2Q9H190 292 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 DMAP1Q9NPF5 467 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-219ENST00000588411 HPS4Q9NQG7 708 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 DUS2Q9NX74 493 aaKnown RBP23.17■■□□□ 1.3
CIRBP-219ENST00000588411 MYO15AQ9UKN7 3530 aa23.17■■□□□ 1.3
CIRBP-219ENST00000588411 RIF1Q5UIP0 2472 aaKnown RBP23.17■■□□□ 1.3
CIRBP-219ENST00000588411 ZNF840PA6NDX5 716 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 STX10O60499 249 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 ABL1P00519 1130 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 TRIM49P0CI25 452 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 TRIM49CP0CI26 452 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 TCF3P15923 654 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 YWHAQP27348 245 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 GRSF1Q12849 480 aaKnown RBP eCLIP23.16■■□□□ 1.36e-8■□□□□ 11.1
CIRBP-219ENST00000588411 TAF10Q12962 218 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 ZNF658Q5TYW1 1059 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-219ENST00000588411 TRIM68Q6AZZ1 485 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 ACOT1Q86TX2 421 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 SMYD4Q8IYR2 804 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-219ENST00000588411 SH3RF2Q8TEC5 729 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 SMARCE1Q969G3 411 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 TIGD1Q96MW7 591 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 CYP3A43Q9HB55 503 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 TMEM8AQ9HCN3 771 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 PATJQ8NI35 1801 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 DENND4CQ5VZ89 1909 aa23.16■■□□□ 1.3
CIRBP-219ENST00000588411 FAM186AA6NE01 2351 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 ARSAP15289 507 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 ASPAP45381 313 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 NDST1P52848 882 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 CACNA2D1P54289 1103 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 IFRD2Q12894 506 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-219ENST00000588411 NR1H3Q13133 447 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 SPOPLQ6IQ16 392 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 TSSK4Q6SA08 328 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 ZBTB44Q8NCP5 570 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 OVCA2Q8WZ82 227 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 NELL1Q92832 810 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 ELMO3Q96BJ8 720 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 HINFPQ9BQA5 517 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 MMRN2Q9H8L6 949 aa23.15■■□□□ 1.3
CIRBP-219ENST00000588411 KRT82Q9NSB4 513 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms