RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 PLPP6Q8IY26 295 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 HASPINQ8TF76 798 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 LRRC4Q9HBW1 653 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 CRTAC1Q9NQ79 661 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 ASNSD1Q9NWL6 643 aa11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 CHORDC1Q9UHD1 332 aaPredicted RBP11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 TTC7AQ9ULT0 858 aaPredicted RBP11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 SF3B1O75533 1304 aaKnown RBP eCLIP11.06□□□□□ -0.64
CHMP1B-202ENST00000588284 E5RJQ4 531 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 DDX3YO15523 660 aaKnown RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 SART1O43290 800 aaKnown RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 CTIFO43310 598 aaKnown RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 HCRTO43612 131 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 CEP104O60308 925 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 AP1G2O75843 785 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 RNF8O76064 485 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 FBXO21O94952 628 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 ITGB1P05556 798 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 FGFR3P22607 806 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 RGS7P49802 495 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 BCAR1P56945 870 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 MRPL58Q14197 206 aaKnown RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 HADHQ16836 314 aaKnown RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 FAM102AQ5T9C2 384 aaPredicted RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 LRRC38Q5VT99 294 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 FAM171A1Q5VUB5 890 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 KIAA0319Q5VV43 1072 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 CCDC70Q6NSX1 233 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 CC2D1AQ6P1N0 951 aaPredicted RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 PAQR9Q6ZVX9 377 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 ZNF572Q7Z3I7 529 aaPredicted RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 CMTR2Q8IYT2 770 aaKnown RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 NIPA2Q8N8Q9 360 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 ACTRT1Q8TDG2 376 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 GOLGA1Q92805 767 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 VWCEQ96DN2 955 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 SMARCD1Q96GM5 515 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 BTBD6Q96KE9 485 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 CAPZA3Q96KX2 299 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 MCEEQ96PE7 176 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 LPIN3Q9BQK8 851 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 RTP3Q9BQQ7 232 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 HTATIP2Q9BUP3 242 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 STK39Q9UEW8 545 aa11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 PACSIN2Q9UNF0 486 aaPredicted RBP11.05□□□□□ -0.64
CHMP1B-202ENST00000588284 TANC1Q9C0D5 1861 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 UQCRHLA0A096LP55 91 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 ZNF185O15231 689 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 PSTPIP1O43586 416 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 B4GALT3O60512 393 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 TUBBP07437 444 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 UQCRHP07919 91 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 GLI1P08151 1106 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 LAG3P18627 525 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 GPD1P21695 349 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 PSMA2P25787 234 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 ITGB8P26012 769 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 CXCR5P32302 372 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 CTNNA1P35221 906 aaKnown RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 RFC1P35251 1148 aaPredicted RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 GATMP50440 423 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 PEX5P50542 639 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 WDR5P61964 334 aaKnown RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 RPL7AP62424 266 aaKnown RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 FPGSQ05932 587 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 PPP2R5EQ16537 467 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 CTXN3Q4LDR2 81 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 VARS2Q5ST30 1063 aaKnown RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 SPOUT1Q5T280 376 aaKnown RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 SEL1L2Q5TEA6 688 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 FUT10Q6P4F1 479 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 ANKS3Q6ZW76 656 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 FAM35AQ86V20 835 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 PIGZQ86VD9 579 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 SPATA2LQ8IUW3 424 aaPredicted RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 SCUBE3Q8IX30 993 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 RASGEF1CQ8N431 466 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 MAIP1Q8WWC4 291 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 CD101Q93033 1021 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 ZNF689Q96CS4 500 aaPredicted RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 FUBP3Q96I24 572 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 ZNF558Q96NG5 402 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 PSMB7Q99436 277 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 CNPY3Q9BT09 278 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 ZCWPW1Q9H0M4 648 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 GOLPH3Q9H4A6 298 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 CWH43Q9H720 699 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 CSNK1G1Q9HCP0 422 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 PNPLA8Q9NP80 782 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 AAASQ9NRG9 546 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 METTL5Q9NRN9 209 aaKnown RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 DDX56Q9NY93 547 aaKnown RBP11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 TMEM59LQ9UK28 342 aa11.04□□□□□ -0.64
CHMP1B-202ENST00000588284 SCN5AQ14524 2016 aa11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
CHMP1B-202ENST00000588284 TULP2O00295 520 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms