RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OSCP1Q8WVF1 389 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 ZNF518BQ9C0D4 1074 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 LINC00597Q9H2U6 94 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 SMYD3Q9H7B4 428 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 EXOC1Q9NV70 894 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 TMEM30AQ9NV96 361 aa15.3■□□□□ 0.04
VMP1-206ENST00000587945 CGNQ9P2M7 1197 aaKnown RBP15.3■□□□□ 0.04
VMP1-206ENST00000587945 FANCMQ8IYD8 2048 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 DNAH14Q0VDD8 3507 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 DMXL1Q9Y485 3027 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 LRRIQ3A6PVS8 624 aaPredicted RBP15.29■□□□□ 0.04
VMP1-206ENST00000587945 A8MXQ7 604 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 CLSTN1O94985 981 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 GJA4P35212 333 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 RAP1GAPP47736 663 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 IFNAR2P48551 515 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 ZXDBP98169 803 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 SPEM2Q0P670 501 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 PUM1Q14671 1186 aaKnown RBP eCLIP15.29■□□□□ 0.04
VMP1-206ENST00000587945 EML3Q32P44 896 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 CPA6Q8N4T0 437 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 GOLGA5Q8TBA6 731 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 PARD3BQ8TEW8 1205 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 C8orf48Q96LL4 319 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 B3GNT5Q9BYG0 378 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 DMAC2Q9NW81 257 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 DLL3Q9NYJ7 618 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 TRPM5Q9NZQ8 1165 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
VMP1-206ENST00000587945 TCHHQ07283 1943 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 ZNF840PA6NDX5 716 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 TRIM66O15016 1216 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 RNF40O75150 1001 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 STAU1O95793 577 aaKnown RBP15.28■□□□□ 0.04
VMP1-206ENST00000587945 ABL1P00519 1130 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 C4BPAP04003 597 aaKnown RBP15.28■□□□□ 0.04
VMP1-206ENST00000587945 FAM163BP0C2L3 166 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 CMA1P23946 247 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 ATICP31939 592 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 DLG4P78352 724 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 IFRD2Q12894 506 aaPredicted RBP15.28■□□□□ 0.04
VMP1-206ENST00000587945 LAIR1Q6GTX8 287 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 SCARA5Q6ZMJ2 495 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 B3GALNT2Q8NCR0 500 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 SYAP1Q96A49 352 aaPredicted RBP15.28■□□□□ 0.04
VMP1-206ENST00000587945 P2RY13Q9BPV8 354 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 TTLL2Q9BWV7 592 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 SDCBP2Q9H190 292 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 KCTD10Q9H3F6 313 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 ARHGAP26Q9UNA1 814 aa15.28■□□□□ 0.04
VMP1-206ENST00000587945 MED19A0JLT2 244 aaPredicted RBP15.27■□□□□ 0.04
VMP1-206ENST00000587945 SCAMP3O14828 347 aaKnown RBP15.27■□□□□ 0.04
VMP1-206ENST00000587945 VNN1O95497 513 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 RETP07949 1114 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 NOP14P78316 857 aaKnown RBP15.27■□□□□ 0.04
VMP1-206ENST00000587945 AMPD2Q01433 879 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 TAF10Q12962 218 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 NCOA4Q13772 614 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 ZNF699Q32M78 642 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 CEP68Q76N32 757 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 WDR5BQ86VZ2 330 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 GPR161Q8N6U8 529 aaKnown RBP15.27■□□□□ 0.04
VMP1-206ENST00000587945 EZH1Q92800 747 aaPredicted RBP15.27■□□□□ 0.04
VMP1-206ENST00000587945 ATP2A3Q93084 1043 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 SPATA32Q96LK8 384 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 CEP295NLQ96MC4 621 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 ELOVL4Q9GZR5 314 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 RNF38Q9H0F5 515 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 SMPD4Q9NXE4 827 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 HPSEQ9Y251 543 aa15.27■□□□□ 0.04
VMP1-206ENST00000587945 NUP210Q8TEM1 1887 aaPredicted RBP15.27■□□□□ 0.03
VMP1-206ENST00000587945 LEFTY2O00292 366 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 NR3C1P04150 777 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 DRD1P21728 446 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 HOXA6P31267 233 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 CNR2P34972 360 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 CLDN10P78369 228 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 PSMD2Q13200 908 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 ORC1Q13415 861 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 ZNF667Q5HYK9 610 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.26■□□□□ 0.03
VMP1-206ENST00000587945 SLC9A9Q8IVB4 645 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 CD101Q93033 1021 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 KCNK16Q96T55 309 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 VRTNQ9H8Y1 702 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.26■□□□□ 0.03
VMP1-206ENST00000587945 SLC8A2Q9UPR5 921 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 CPQQ9Y646 472 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.26■□□□□ 0.03
VMP1-206ENST00000587945 CEP250Q9BV73 2442 aa15.26■□□□□ 0.03
VMP1-206ENST00000587945 ATG13O75143 517 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 RPN1P04843 607 aaKnown RBP15.25■□□□□ 0.03
VMP1-206ENST00000587945 TCF3P15923 654 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 SYKP43405 635 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 PDE6CP51160 858 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 NDUFA8P51970 172 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 AP3M2P53677 418 aa15.25■□□□□ 0.03
VMP1-206ENST00000587945 ATXN1P54253 815 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms