RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 SIX4Q9UIU6 781 aa15.14■□□□□ 0.01
CXXC1-208ENST00000587170 AGAP1Q9UPQ3 857 aa15.14■□□□□ 0.01
CXXC1-208ENST00000587170 INVSQ9Y283 1065 aa15.14■□□□□ 0.01
CXXC1-208ENST00000587170 NEUROG3Q9Y4Z2 214 aa15.14■□□□□ 0.01
CXXC1-208ENST00000587170 SRRM3A6NNA2 597 aaPredicted RBP15.13■□□□□ 0.01
CXXC1-208ENST00000587170 TNFRSF10BO14763 440 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 HDCP19113 662 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 SPINK2P20155 84 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 HOXD12P35452 270 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 SLC7A9P82251 487 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 TFAMQ00059 246 aaKnown RBP15.13■□□□□ 0.01
CXXC1-208ENST00000587170 KCNA1Q09470 495 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 LMAN2Q12907 356 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 SOWAHAQ2M3V2 549 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 C2orf27AQ580R0 203 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 SCARA3Q6AZY7 606 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 TMEM92Q6UXU6 159 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 PIP4P1Q86T03 277 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 SPATA2LQ8IUW3 424 aaPredicted RBP15.13■□□□□ 0.01
CXXC1-208ENST00000587170 ZSWIM2Q8NEG5 633 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 CACTINQ8WUQ7 758 aaKnown RBP15.13■□□□□ 0.01
CXXC1-208ENST00000587170 KBTBD7Q8WVZ9 684 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 FAM213AQ9BRX8 229 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 OLFML3Q9NRN5 406 aa15.13■□□□□ 0.01
CXXC1-208ENST00000587170 CKAP5Q14008 2032 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 A0A0A0MRY4 1105 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 ANTXRLA6NF34 631 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 LEFTY2O00292 366 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 HCRTO43612 131 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 LDHAP00338 332 aaKnown RBP15.12■□□□□ 0.01
CXXC1-208ENST00000587170 HOXB3P14651 431 aaPredicted RBP15.12■□□□□ 0.01
CXXC1-208ENST00000587170 GARTP22102 1010 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 DDIT3P35638 169 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 DPP6P42658 865 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 MESP2Q0VG99 397 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 COL9A2Q14055 689 aaPredicted RBP15.12■□□□□ 0.01
CXXC1-208ENST00000587170 L1TD1Q5T7N2 865 aaKnown RBP15.12■□□□□ 0.01
CXXC1-208ENST00000587170 C4orf50Q6ZRC1 276 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 DPH6Q7L8W6 267 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 SYT12Q8IV01 421 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
CXXC1-208ENST00000587170 IL17RCQ8NAC3 791 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 DEFB124Q8NES8 71 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 WHAMMQ8TF30 809 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 DNAJC19Q96DA6 116 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 RBAKQ9NYW8 714 aaPredicted RBP15.12■□□□□ 0.01
CXXC1-208ENST00000587170 STK17AQ9UEE5 414 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 EXOC7Q9UPT5 735 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 SNX9Q9Y5X1 595 aa15.12■□□□□ 0.01
CXXC1-208ENST00000587170 APC2O95996 2303 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 ALDH1A2O94788 518 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 OAS1P00973 400 aaKnown RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 GAP43P17677 238 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 KIR2DL1P43626 348 aaPredicted RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 PPP3CCP48454 512 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 DHPSP49366 369 aaPredicted RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SEC13P55735 322 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 USP46P62068 366 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SEMA3BQ13214 749 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 TRIM61Q5EBN2 209 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 LMBRD2Q68DH5 695 aaPredicted RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SLC23A3Q6PIS1 610 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 DENND5BQ6ZUT9 1274 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 LPCAT2Q7L5N7 544 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 FILIP1Q7Z7B0 1213 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SFTPA1Q8IWL2 248 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SCN4BQ8IWT1 228 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 PHTF2Q8N3S3 785 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 CCDC33Q8N5R6 958 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 ALLCQ8N6M5 410 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 ZCCHC14Q8WYQ9 949 aaKnown RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 PIGKQ92643 395 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 MYLPFQ96A32 169 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SAAL1Q96ER3 474 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 FAM84AQ96KN4 292 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SPACA7Q96KW9 195 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 ACCSQ96QU6 501 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SYT15Q9BQS2 421 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 MTMR12Q9C0I1 747 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 CRTAC1Q9NQ79 661 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 MBD1Q9UIS9 605 aaPredicted RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 CDH9Q9ULB4 789 aa15.11■□□□□ 0.01
CXXC1-208ENST00000587170 SETXQ7Z333 2677 aaKnown RBP15.11■□□□□ 0.01
CXXC1-208ENST00000587170 FRMD3A2A2Y4 597 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 FAM221BA6H8Z2 402 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 ZNF840PA6NDX5 716 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 SGK1O00141 431 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 SLC9A3R1O14745 358 aaPredicted RBP15.1■□□□□ 0.01
CXXC1-208ENST00000587170 ADAM23O75077 832 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 ATP2C2O75185 946 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 GJB2P29033 226 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 PTGER3P43115 390 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 RBP5P82980 135 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 ALCAMQ13740 583 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 DHCR24Q15392 516 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 MAPRE1Q15691 268 aaKnown RBP15.1■□□□□ 0.01
CXXC1-208ENST00000587170 MAP7D1Q3KQU3 841 aa15.1■□□□□ 0.01
CXXC1-208ENST00000587170 ADGRG2Q8IZP9 1017 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms