RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CDH22Q9UJ99 828 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 COL6A3P12111 3177 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 THAP12O43422 761 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 MICAL2O94851 1124 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 RTN3O95197 1032 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-204ENST00000586558 HMGA1P17096 107 aaKnown RBP20.27■□□□□ 0.84
DDX39A-204ENST00000586558 FSHRP23945 695 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 CLCN1P35523 988 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 SOX5P35711 763 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 KCNQ1P51787 676 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 MAP3K7CLP57077 242 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 BST2Q10589 180 aaKnown RBP20.27■□□□□ 0.84
DDX39A-204ENST00000586558 SDHAF4Q5VUM1 108 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 PDZD4Q76G19 769 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-204ENST00000586558 TMC8Q8IU68 726 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDX39A-204ENST00000586558 ZMIZ2Q8NF64 920 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 FEZF2Q8TBJ5 459 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 GPR152Q8TDT2 470 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 KCNK16Q96T55 309 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 ZSWIM1Q9BR11 485 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 TTLL2Q9BWV7 592 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 PHF7Q9BWX1 381 aaPredicted RBP20.27■□□□□ 0.84
DDX39A-204ENST00000586558 LRRC3Q9BY71 257 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 UBXN6Q9BZV1 441 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 COMMD8Q9NX08 183 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 PRKAG3Q9UGI9 489 aa20.27■□□□□ 0.84
DDX39A-204ENST00000586558 ITIH6Q6UXX5 1313 aa20.27■□□□□ 0.83
DDX39A-204ENST00000586558 PNMA6AP0CW24 399 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-204ENST00000586558 PKDCCQ504Y2 493 aa20.26■□□□□ 0.83
DDX39A-204ENST00000586558 TTC30AQ86WT1 665 aa20.26■□□□□ 0.83
DDX39A-204ENST00000586558 NUP93Q8N1F7 819 aa20.26■□□□□ 0.83
DDX39A-204ENST00000586558 ZNF606Q8WXB4 792 aa20.26■□□□□ 0.83
DDX39A-204ENST00000586558 TTYH3Q9C0H2 523 aa20.26■□□□□ 0.83
DDX39A-204ENST00000586558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.26■□□□□ 0.831e-6■■■■□ 20.4
DDX39A-204ENST00000586558 USTQ9Y2C2 406 aa20.26■□□□□ 0.83
DDX39A-204ENST00000586558 MRPS23Q9Y3D9 190 aaKnown RBP20.26■□□□□ 0.83
DDX39A-204ENST00000586558 M0QYV0 167 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 TNFRSF10BO14763 440 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 XPO1O14980 1071 aaKnown RBP20.25■□□□□ 0.83
DDX39A-204ENST00000586558 BEST1O76090 585 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 MYL4P12829 197 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 CDC25CP30307 473 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 PDE6CP51160 858 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 NTHL1P78549 312 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 PLCB2Q00722 1185 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 PTPN21Q16825 1174 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 OTOP3Q7RTS5 596 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 SLC47A2Q86VL8 602 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 HS6ST3Q8IZP7 471 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 ZNF334Q9HCZ1 680 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-204ENST00000586558 IL37Q9NZH6 218 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 MAGED2Q9UNF1 606 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-204ENST00000586558 PRUNE2Q8WUY3 3088 aa20.25■□□□□ 0.83
DDX39A-204ENST00000586558 A0A1W2PQJ5 194 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 HHLA1C9JL84 531 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 GFPT2O94808 682 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 CCDC172P0C7W6 258 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 IL9P15248 144 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 CYP11B1P15538 503 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 PLA2G4AP47712 749 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 SLC5A3P53794 718 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 PDE4CQ08493 712 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 MTMR3Q13615 1198 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 PRSS36Q5K4E3 855 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 SPECC1LQ69YQ0 1117 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 BAP1Q92560 729 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 TRIM5Q9C035 493 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 FBXO44Q9H4M3 255 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 IL21Q9HBE4 155 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 ACP6Q9NPH0 428 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 ZMYM5Q9UJ78 669 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 PCDHGC3Q9UN70 934 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 NR2E1Q9Y466 385 aa20.24■□□□□ 0.83
DDX39A-204ENST00000586558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.24■□□□□ 0.831e-9■■■□□ 17
DDX39A-204ENST00000586558 ZFP37Q9Y6Q3 630 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-204ENST00000586558 C2orf16Q68DN1 1984 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 CALCAP01258 141 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 BMP1P13497 986 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 YWHAQP27348 245 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 GABRR2P28476 465 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 KRT9P35527 623 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 CCR2P41597 374 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 PPP3CCP48454 512 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 TRIM14Q14142 442 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 SLC5A9Q2M3M2 681 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 GAREM2Q75VX8 874 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 PIGZQ86VD9 579 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 ZNF677Q86XU0 584 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 ADHFE1Q8IWW8 467 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 STKLD1Q8NE28 680 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 PDZD8Q8NEN9 1154 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 ZNF397Q8NF99 534 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-204ENST00000586558 UBA3Q8TBC4 463 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 EPS8L1Q8TE68 723 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 OVCA2Q8WZ82 227 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 ACSF2Q96CM8 615 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-204ENST00000586558 SLITRK1Q96PX8 696 aa20.23■□□□□ 0.83
DDX39A-204ENST00000586558 NUCKS1Q9H1E3 243 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms