RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 TOP3BO95985 862 aaKnown RBP16.09■□□□□ 0.17
SF3A2-202ENST00000586396 HOXD13P35453 343 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 ACAP1Q15027 740 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 UAP1L1Q3KQV9 507 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 SDHAF4Q5VUM1 108 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 ANO7Q6IWH7 933 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 UNC13DQ70J99 1090 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 PDILTQ8N807 584 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 CCDC26Q8TAB7 109 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 ZNF507Q8TCN5 953 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 ZCCHC14Q8WYQ9 949 aaKnown RBP16.09■□□□□ 0.17
SF3A2-202ENST00000586396 GATA6Q92908 595 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 ZNF560Q96MR9 790 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 IKZF4Q9H2S9 585 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 DPP3Q9NY33 737 aa16.09■□□□□ 0.17
SF3A2-202ENST00000586396 PLXND1Q9Y4D7 1925 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 TRAV19A0A0A6YYK7 116 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 PVALEFA0A1B0GWK0 134 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 USP17L7P0C7H9 530 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 IDEP14735 1019 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 PNPLA4P41247 253 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 SEC13P55735 322 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 NFE2Q16621 373 aaPredicted RBP16.08■□□□□ 0.16
SF3A2-202ENST00000586396 KIAA1211LQ6NV74 962 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 LIMS2Q7Z4I7 341 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 TTC30AQ86WT1 665 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 C12orf56Q8IXR9 622 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 LRRC52Q8N7C0 313 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 DEFB124Q8NES8 71 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 CBWD1Q9BRT8 395 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 TMLHEQ9NVH6 421 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 ZDHHC9Q9Y397 364 aa16.08■□□□□ 0.16
SF3A2-202ENST00000586396 SRRM3A6NNA2 597 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 KPNA7A9QM74 516 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 CDX4O14627 284 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 MYL1P05976 194 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 HSP90AA1P07900 732 aaKnown RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 BCKDHBP21953 392 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 DHPSP49366 369 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 WNT7BP56706 349 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 RPL10AP62906 217 aaKnown RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 NR1H3Q13133 447 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 KCNB1Q14721 858 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 DDR2Q16832 855 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 EML3Q32P44 896 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 C2orf27AQ580R0 203 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 TRMT2BQ96GJ1 504 aaKnown RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 CNOT6LQ96LI5 555 aaKnown RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 SLC22A12Q96S37 553 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 KIAA1586Q9HCI6 787 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 CGNQ9P2M7 1197 aaKnown RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
SF3A2-202ENST00000586396 HPSEQ9Y251 543 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 PI4KAP42356 2102 aa16.07■□□□□ 0.16
SF3A2-202ENST00000586396 CACNA1EQ15878 2313 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 NOL4O94818 638 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 NFATC1O95644 943 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 IRX4P78413 519 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 DNM1Q05193 864 aaKnown RBP16.06■□□□□ 0.16
SF3A2-202ENST00000586396 LMAN2Q12907 356 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 SURF1Q15526 300 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 FAM26FQ5R3K3 315 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 GPD1LQ8N335 351 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 C1orf127Q8N9H9 656 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 FSIP1Q8NA03 581 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 GLIS3Q8NEA6 775 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 MDGA1Q8NFP4 955 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 SH3RF2Q8TEC5 729 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 USP33Q8TEY7 942 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 PIGKQ92643 395 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 DHX58Q96C10 678 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 SPACA7Q96KW9 195 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 CYP2S1Q96SQ9 504 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 NUSAP1Q9BXS6 441 aaKnown RBP16.06■□□□□ 0.16
SF3A2-202ENST00000586396 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 GDAP2Q9NXN4 497 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 RBAKQ9NYW8 714 aaPredicted RBP16.06■□□□□ 0.16
SF3A2-202ENST00000586396 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 ITGA11Q9UKX5 1188 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 MMP17Q9ULZ9 603 aa16.06■□□□□ 0.16
SF3A2-202ENST00000586396 GCN1Q92616 2671 aaKnown RBP16.06■□□□□ 0.16
SF3A2-202ENST00000586396 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
SF3A2-202ENST00000586396 TGFB1I1O43294 461 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 ACTN4O43707 911 aaKnown RBP16.05■□□□□ 0.16
SF3A2-202ENST00000586396 PRPF6O94906 941 aaKnown RBP16.05■□□□□ 0.16
SF3A2-202ENST00000586396 SLFN14P0C7P3 912 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 CMA1P23946 247 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 CYP2F1P24903 491 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 MAPK8P45983 427 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 TRIM61Q5EBN2 209 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 ARL14EPQ8N8R7 260 aaPredicted RBP16.05■□□□□ 0.16
SF3A2-202ENST00000586396 ZSWIM2Q8NEG5 633 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 SLC32A1Q9H598 525 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
SF3A2-202ENST00000586396 TBC1D7Q9P0N9 293 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms