RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CTAGE4Q8IX94 777 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 JOSD2Q8TAC2 188 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 KRT35Q92764 455 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 KHSRPQ92945 711 aaKnown RBP eCLIP14.73□□□□□ -0.05
UBBP4-202ENST00000584755 MYLPFQ96A32 169 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 SMARCD1Q96GM5 515 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 GPR62Q9BZJ7 368 aa14.73□□□□□ -0.05
UBBP4-202ENST00000584755 METTL5Q9NRN9 209 aaKnown RBP14.73□□□□□ -0.05
UBBP4-202ENST00000584755 NLRC5Q86WI3 1866 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 PSTPIP1O43586 416 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 BEST1O76090 585 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 UPP2O95045 317 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 MARCKSL1P49006 195 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 DNA2P51530 1060 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 BCAR1P56945 870 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 DEFB103AP81534 67 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 TSPY1Q01534 308 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 ACAP1Q15027 740 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 VARS2Q5ST30 1063 aaKnown RBP14.72□□□□□ -0.05
UBBP4-202ENST00000584755 FAM102AQ5T9C2 384 aaPredicted RBP14.72□□□□□ -0.05
UBBP4-202ENST00000584755 OR6B2Q6IFH4 312 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 C16orf59Q7L2K0 433 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 SLC26A9Q7LBE3 791 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 ZMIZ2Q8NF64 920 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 PIWIL1Q96J94 861 aaKnown RBP14.72□□□□□ -0.05
UBBP4-202ENST00000584755 MS4A14Q96JA4 679 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 TMEM209Q96SK2 561 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 SMOQ99835 787 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 MED10Q9BTT4 135 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 ZCWPW1Q9H0M4 648 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 KRT82Q9NSB4 513 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 TMLHEQ9NVH6 421 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 PTPRDP23468 1912 aa14.72□□□□□ -0.05
UBBP4-202ENST00000584755 C2CD4BA6NLJ0 364 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 TBC1D4O60343 1298 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 AP1G2O75843 785 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 PAFAH1B1P43034 410 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 PPIGQ13427 754 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBBP4-202ENST00000584755 RAB41Q5JT25 222 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 CCDC181Q5TID7 509 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 LRRC38Q5VT99 294 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 FAM171A1Q5VUB5 890 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 TMEM173Q86WV6 379 aaPredicted RBP14.71□□□□□ -0.05
UBBP4-202ENST00000584755 SCUBE3Q8IX30 993 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 CMTR2Q8IYT2 770 aaKnown RBP14.71□□□□□ -0.05
UBBP4-202ENST00000584755 RNF168Q8IYW5 571 aaPredicted RBP14.71□□□□□ -0.05
UBBP4-202ENST00000584755 BCL7CQ8WUZ0 217 aaPredicted RBP14.71□□□□□ -0.05
UBBP4-202ENST00000584755 GOLGA1Q92805 767 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 TMEM30AQ9NV96 361 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 PTPRSQ13332 1948 aa14.71□□□□□ -0.05
UBBP4-202ENST00000584755 MKI67P46013 3256 aaKnown RBP14.71□□□□□ -0.06
UBBP4-202ENST00000584755 CARNS1A5YM72 827 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 HHLA1C9JL84 531 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 F8VP50 259 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 PIK3R2O00459 728 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 DPYSL4O14531 572 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 CEP104O60308 925 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 ACRP10323 421 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 ZNF143P52747 638 aaPredicted RBP14.7□□□□□ -0.06
UBBP4-202ENST00000584755 CACNA2D1P54289 1103 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 RWDD2BP57060 319 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 TAS2R40P59535 323 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 ADCY1Q08828 1119 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 TRNP1Q6NT89 227 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 C4orf50Q6ZRC1 276 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 RHOT1Q8IXI2 618 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 EMC1Q8N766 993 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 SPATA4Q8NEY3 305 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.7□□□□□ -0.06
UBBP4-202ENST00000584755 OXCT2Q9BYC2 517 aaPredicted RBP14.7□□□□□ -0.06
UBBP4-202ENST00000584755 PNPLA8Q9NP80 782 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 EHD2Q9NZN4 543 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 PATJQ8NI35 1801 aa14.7□□□□□ -0.06
UBBP4-202ENST00000584755 OR6C75A6NL08 312 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 PGRMC1O00264 195 aaKnown RBP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 GPD1P21695 349 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 PSMA2P25787 234 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 FLT3P36888 993 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 ALDH7A1P49419 539 aaKnown RBP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 MAP3K7CLP57077 242 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 CLUL1Q15846 466 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 ZNF280DQ6N043 979 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 CC2D1AQ6P1N0 951 aaPredicted RBP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 KATNAL2Q8IYT4 538 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 DCP1BQ8IZD4 617 aaKnown RBP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 SCML4Q8N228 414 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 ARFGAP1Q8N6T3 406 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 FUBP3Q96I24 572 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 IGSF21Q96ID5 467 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 RNPC3Q96LT9 517 aaKnown RBP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 CNPY3Q9BT09 278 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 DMAP1Q9NPF5 467 aaPredicted RBP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 ASNSD1Q9NWL6 643 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 SMARCAL1Q9NZC9 954 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 PRKAG2Q9UGJ0 569 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.69□□□□□ -0.06
UBBP4-202ENST00000584755 NT5C1B-RDH14C9J2C7 533 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 LRCH4O75427 683 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 FBXO21O94952 628 aa14.69□□□□□ -0.06
UBBP4-202ENST00000584755 GLI1P08151 1106 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms