RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 EDEM2Q9BV94 578 aa17.73■□□□□ 0.43
CCDC57-219ENST00000584717 EBF1Q9UH73 591 aa17.73■□□□□ 0.43
CCDC57-219ENST00000584717 CDH9Q9ULB4 789 aa17.73■□□□□ 0.43
CCDC57-219ENST00000584717 PTPRDP23468 1912 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 LEFTY2O00292 366 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 KCNK5O95279 499 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 NFATC1O95644 943 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 CAVIN2O95810 425 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 OPRD1P41143 372 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 CUL4AQ13619 759 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 C2orf27AQ580R0 203 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 VSTM1Q6UX27 236 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 DPH6Q7L8W6 267 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 LIMS2Q7Z4I7 341 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 CCDC65Q8IXS2 484 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 SPATA17Q96L03 361 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 MMS19Q96T76 1030 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 LSM14BQ9BX40 385 aaKnown RBP17.72■□□□□ 0.43
CCDC57-219ENST00000584717 TRPM5Q9NZQ8 1165 aa17.72■□□□□ 0.43
CCDC57-219ENST00000584717 BCLAF3A2AJT9 711 aaKnown RBP17.71■□□□□ 0.43
CCDC57-219ENST00000584717 ZNF233A6NK53 670 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 K7EQS6 105 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 SCAMP3O14828 347 aaKnown RBP17.71■□□□□ 0.43
CCDC57-219ENST00000584717 TCF3P15923 654 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 WARSP23381 471 aaKnown RBP17.71■□□□□ 0.43
CCDC57-219ENST00000584717 ANXA13P27216 316 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 PDE6CP51160 858 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 DUOXA2Q1HG44 320 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 MDH1BQ5I0G3 518 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 ANO7Q6IWH7 933 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 PSAPL1Q6NUJ1 521 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 DENND5BQ6ZUT9 1274 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 TTC30AQ86WT1 665 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 USP33Q8TEY7 942 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 PCED1BQ96HM7 432 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 USP28Q96RU2 1077 aa17.71■□□□□ 0.43
CCDC57-219ENST00000584717 ABCA7Q8IZY2 2146 aa17.71■□□□□ 0.42
CCDC57-219ENST00000584717 KIAA0391O15091 583 aaKnown RBP17.7■□□□□ 0.42
CCDC57-219ENST00000584717 SYT1P21579 422 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 SURF1Q15526 300 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 MAPRE1Q15691 268 aaKnown RBP17.7■□□□□ 0.42
CCDC57-219ENST00000584717 GAB4Q2WGN9 574 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 FILIP1Q7Z7B0 1213 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 CCDC33Q8N5R6 958 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 MRPL45Q9BRJ2 306 aaKnown RBP17.7■□□□□ 0.42
CCDC57-219ENST00000584717 SMPD4Q9NXE4 827 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 HSPBP1Q9NZL4 362 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 NME7Q9Y5B8 376 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 NUP205Q92621 2012 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 THADAQ6YHU6 1953 aa17.7■□□□□ 0.42
CCDC57-219ENST00000584717 ZNF840PA6NDX5 716 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 C4orf47A7E2U8 309 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 F8VP50 259 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 TRIM66O15016 1216 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 ABL1P00519 1130 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 CYP17A1P05093 508 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 BCKDHBP21953 392 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 HOXD13P35453 343 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 SLC39A14Q15043 492 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 USP39Q53GS9 565 aaKnown RBP17.69■□□□□ 0.42
CCDC57-219ENST00000584717 PMS2CLQ68D20 193 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 HS2ST1Q7LGA3 356 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 TRAPPC11Q7Z392 1133 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 WDR49Q8IV35 697 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 SFTPA1Q8IWL2 248 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 MYCBPAPQ8TBZ2 947 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 TTLL2Q9BWV7 592 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 SNX25Q9H3E2 840 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 CPQQ9Y646 472 aa17.69■□□□□ 0.42
CCDC57-219ENST00000584717 LNP1A1A4G5 178 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 CST3P01034 146 aaPredicted RBP17.68■□□□□ 0.42
CCDC57-219ENST00000584717 DLATP10515 647 aaKnown RBP17.68■□□□□ 0.42
CCDC57-219ENST00000584717 PFKLP17858 780 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 CACNA2D1P54289 1103 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 SLC7A9P82251 487 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 SHC2P98077 582 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 MESP2Q0VG99 397 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 IFRD2Q12894 506 aaPredicted RBP17.68■□□□□ 0.42
CCDC57-219ENST00000584717 RDH13Q8NBN7 331 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 MDGA1Q8NFP4 955 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 OR6B3Q8NGW1 331 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 CEP295NLQ96MC4 621 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 TMEM30AQ9NV96 361 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 MMP17Q9ULZ9 603 aa17.68■□□□□ 0.42
CCDC57-219ENST00000584717 PATE3B3GLJ2 98 aa17.67■□□□□ 0.42
CCDC57-219ENST00000584717 GIPC1O14908 333 aa17.67■□□□□ 0.42
CCDC57-219ENST00000584717 HNRNPLP14866 589 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCDC57-219ENST00000584717 GNL1P36915 607 aaPredicted RBP17.67■□□□□ 0.42
CCDC57-219ENST00000584717 SLC6A11P48066 632 aa17.67■□□□□ 0.42
CCDC57-219ENST00000584717 NOVA1P51513 510 aaKnown RBP17.67■□□□□ 0.42
CCDC57-219ENST00000584717 NOP14P78316 857 aaKnown RBP17.67■□□□□ 0.42
CCDC57-219ENST00000584717 TAF10Q12962 218 aa17.67■□□□□ 0.42
CCDC57-219ENST00000584717 DHCR24Q15392 516 aa17.67■□□□□ 0.42
CCDC57-219ENST00000584717 SNRNP35Q16560 246 aaKnown RBP17.67■□□□□ 0.42
CCDC57-219ENST00000584717 CYP2U1Q7Z449 544 aa17.67■□□□□ 0.42
CCDC57-219ENST00000584717 RASSF3Q86WH2 238 aa17.67■□□□□ 0.42
CCDC57-219ENST00000584717 CNOT6LQ96LI5 555 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms