RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 LRRC3Q9BY71 257 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 RNF26Q9BY78 433 aaPredicted RBP6.8□□□□□ -1.32
CTC1-212ENST00000584439 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.8□□□□□ -1.32
CTC1-212ENST00000584439 ASPSCR1Q9BZE9 553 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 ZNF700Q9H0M5 742 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
CTC1-212ENST00000584439 TNKS2Q9H2K2 1166 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 SLITRK6Q9H5Y7 841 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 PPCSQ9HAB8 311 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
CTC1-212ENST00000584439 UBN1Q9NPG3 1134 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 CASS4Q9NQ75 786 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 HPS4Q9NQG7 708 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 TOR4AQ9NXH8 423 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 KCNK4Q9NYG8 393 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 VPS54Q9P1Q0 977 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 EBF1Q9UH73 591 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 ZNF232Q9UNY5 417 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 TLR6Q9Y2C9 796 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 INSL5Q9Y5Q6 135 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 TCHHQ07283 1943 aa6.8□□□□□ -1.32
CTC1-212ENST00000584439 PRRG1O14668 218 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 ZNF197O14709 1029 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 MSH4O15457 936 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 OPHN1O60890 802 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 ATG13O75143 517 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 MAFO75444 373 aaPredicted RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 GJB3O75712 270 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 GJB6O95452 261 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 CIITAP33076 1130 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 SOX5P35711 763 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 BRCC3P46736 316 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 GIPRP48546 466 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 GALK1P51570 392 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 CCT2P78371 535 aaKnown RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 SPIRE1Q08AE8 756 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 GRIK3Q13003 919 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 LY6DQ14210 128 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 HLTFQ14527 1009 aaKnown RBP eCLIP6.79□□□□□ -1.32
CTC1-212ENST00000584439 SNAP47Q5SQN1 464 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 CYP4A22Q5TCH4 519 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 ANO7Q6IWH7 933 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 C1orf228Q6PIY5 440 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 RUFY3Q7L099 469 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 SYT13Q7L8C5 426 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 SMAP1Q8IYB5 467 aaPredicted RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 HDDC3Q8N4P3 179 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 ZNF513Q8N8E2 541 aaPredicted RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 GOLM1Q8NBJ4 401 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 LSM14AQ8ND56 463 aaKnown RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 PHC3Q8NDX5 983 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 MDGA1Q8NFP4 955 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 ATL2Q8NHH9 583 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 ZNF461Q8TAF7 563 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 RIN3Q8TB24 985 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 PRPF31Q8WWY3 499 aaKnown RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 NINJ1Q92982 152 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 TMEM143Q96AN5 459 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 SLC26A6Q9BXS9 759 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 NIFKQ9BYG3 293 aaKnown RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 TRIM4Q9C037 500 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 PHACTR1Q9C0D0 580 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 SUV39H2Q9H5I1 410 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 CYP4F11Q9HBI6 524 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 DISC1Q9NRI5 854 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 PILRBQ9UKJ0 227 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 NAP1L2Q9ULW6 460 aaPredicted RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 SRPK3Q9UPE1 567 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 VPS9D1Q9Y2B5 631 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 GIT1Q9Y2X7 761 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 NOTCH2Q04721 2471 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 CENPEQ02224 2701 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 USP9YO00507 2555 aaPredicted RBP6.79□□□□□ -1.32
CTC1-212ENST00000584439 LRRK2Q5S007 2527 aa6.79□□□□□ -1.32
CTC1-212ENST00000584439 GOLGA8CPA6NN73 597 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 WDR64B1ANS9 1081 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 B8ZZF3 427 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 CDK2AP1O14519 115 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 TRDMT1O14717 391 aaKnown RBP6.78□□□□□ -1.32
CTC1-212ENST00000584439 B4GALT5O43286 388 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 CBFA2T3O75081 653 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 PHACTR2O75167 634 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 FBXO24O75426 580 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 NPTXRO95502 500 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 ATXN1LP0C7T5 689 aaKnown RBP6.78□□□□□ -1.32
CTC1-212ENST00000584439 ARSAP15289 507 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 ARF4P18085 180 aaPredicted RBP6.78□□□□□ -1.32
CTC1-212ENST00000584439 DNM2P50570 870 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 NEK2P51955 445 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 EPHA5P54756 1037 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 NPEPPSP55786 919 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 CLDN6P56747 220 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 LSM11P83369 360 aaKnown RBP eCLIP6.78□□□□□ -1.32
CTC1-212ENST00000584439 LAMTOR4Q0VGL1 99 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 TWF1Q12792 350 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 TUSC3Q13454 348 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 FXNQ16595 210 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 MAPK6Q16659 721 aa6.78□□□□□ -1.32
CTC1-212ENST00000584439 ITPRIPL2Q3MIP1 535 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms