RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
ERBB2-214ENST00000583038 CINPQ9BW66 212 aaPredicted RBP16.99■□□□□ 0.31
ERBB2-214ENST00000583038 AAASQ9NRG9 546 aa16.99■□□□□ 0.31
ERBB2-214ENST00000583038 SELENONQ9NZV5 590 aa16.99■□□□□ 0.31
ERBB2-214ENST00000583038 O00370 1275 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 SERPINB8P50452 374 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 DMC1Q14565 340 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 PKN1Q16512 942 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 MDH1BQ5I0G3 518 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 MAGEB18Q96M61 343 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 TBCBQ99426 244 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 TMEM161AQ9NX61 479 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 CRLS1Q9UJA2 301 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 FAM205AQ6ZU69 1335 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 B3GAT3O94766 335 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 EGFRP00533 1210 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 RRM1P23921 792 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 DAB2P98082 770 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 ZNF177Q13360 481 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 UNC45BQ8IWX7 931 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 SPIRE2Q8WWL2 714 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 PPP1R36Q96LQ0 422 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 LACRTQ9GZZ8 138 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 ARHGAP20Q9P2F6 1191 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 CES2O00748 559 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 NKRFO15226 690 aaKnown RBP eCLIP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 KIF1CO43896 1103 aaKnown RBP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 GRK2P25098 689 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 SV2AQ7L0J3 742 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 SLFN11Q7Z7L1 901 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 PNKPQ96T60 521 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 TMEM51Q9NW97 253 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 NMRK1Q9NWW6 199 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 TRMT6Q9UJA5 497 aaKnown RBP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 SOX13Q9UN79 622 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 LHX1P48742 406 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 FBXW4P57775 412 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 NT5DC1Q5TFE4 455 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 ZNF507Q8TCN5 953 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 SYTL5Q8TDW5 730 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 TAS1R2Q8TE23 839 aa16.98■□□□□ 0.31
ERBB2-214ENST00000583038 RPRD1AQ96P16 312 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 PRDM5Q9NQX1 630 aaPredicted RBP16.98■□□□□ 0.31
ERBB2-214ENST00000583038 FKBP9O95302 570 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 HLA-DPA1P20036 260 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 CORO7P57737 925 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 RPL10AP62906 217 aaKnown RBP16.97■□□□□ 0.31
ERBB2-214ENST00000583038 OTUD4Q01804 1114 aaKnown RBP16.97■□□□□ 0.31
ERBB2-214ENST00000583038 PTPN11Q06124 597 aaPredicted RBP16.97■□□□□ 0.31
ERBB2-214ENST00000583038 NFE2Q16621 373 aaPredicted RBP16.97■□□□□ 0.31
ERBB2-214ENST00000583038 ZRANB3Q5FWF4 1079 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 FKBP9P1Q75LS8 142 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.97■□□□□ 0.31
ERBB2-214ENST00000583038 SLC26A11Q86WA9 606 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 FAM111AQ96PZ2 611 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 PXMP2Q9NR77 195 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 RRN3Q9NYV6 651 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 KANSL1LA0AUZ9 987 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 PMPCBO75439 489 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 TOMM70O94826 608 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 THRAP10827 490 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 ACADSP16219 412 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 TMEM132BQ14DG7 1078 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 PRAMEF18Q5VWM3 479 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 BBS7Q8IWZ6 715 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 CAVIN3Q969G5 261 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 TMEM169Q96HH4 297 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 SYNPO2Q9UMS6 1093 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 ZMYM2Q9UBW7 1377 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 KPNA6O60684 536 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 HOXC6P09630 235 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 FCGRTP55899 365 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 HIST2H2ACQ16777 129 aaPredicted RBP16.97■□□□□ 0.31
ERBB2-214ENST00000583038 HIST2H2AA3Q6FI13 130 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 ADCK2Q7Z695 626 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 PLEKHH3Q7Z736 793 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 TTC30BQ8N4P2 665 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 FBXO36Q8NEA4 188 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 TMBIM4Q9HC24 238 aa16.97■□□□□ 0.31
ERBB2-214ENST00000583038 AGO4Q9HCK5 861 aaKnown RBP16.97■□□□□ 0.31
ERBB2-214ENST00000583038 MTA1Q13330 715 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 ARHGAP15Q53QZ3 475 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 FBXW10Q5XX13 1052 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 SPOCD1Q6ZMY3 1216 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 ZNF571Q7Z3V5 609 aaPredicted RBP16.96■□□□□ 0.31
ERBB2-214ENST00000583038 LRRC34Q8IZ02 419 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 SNX31Q8N9S9 440 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 FBXO25Q8TCJ0 367 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 CISHQ9NSE2 258 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 PHTF1Q9UMS5 762 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 SHOC2Q9UQ13 582 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 IGF2BP3O00425 579 aaKnown RBP eCLIP16.96■□□□□ 0.31
ERBB2-214ENST00000583038 VWA5AO00534 786 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 VHLP40337 213 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 CLCN3P51790 818 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 GCNT1Q02742 428 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 ABRAQ8N0Z2 381 aa16.96■□□□□ 0.31
ERBB2-214ENST00000583038 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms