RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 MYMKA6NI61 221 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 PIRO00625 290 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 OGTO15294 1046 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 AP5Z1O43299 807 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SH3BP5O60239 455 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 KLF8O95600 359 aaPredicted RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 ADRB2P07550 413 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SYPP08247 313 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 FTH1P19P0C7X4 201 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 PLS3P13797 630 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 GPR15P49685 360 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 RPL10AP62906 217 aaKnown RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 C19orf57Q0VDD7 668 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 USP4Q13107 963 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SLC14A1Q13336 389 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 PDIA5Q14554 519 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SAFBQ15424 915 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 NFE2Q16621 373 aaPredicted RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 HSF5Q4G112 596 aaPredicted RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 EOGTQ5NDL2 527 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 JADE1Q6IE81 842 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 BLOC1S3Q6QNY0 202 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SLC36A4Q6YBV0 504 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 C1orf186Q6ZWK4 172 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 RABEPKQ7Z6M1 372 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 CD302Q8IX05 232 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 DEFB119Q8N690 84 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 ALLCQ8N6M5 410 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 ARL14EPQ8N8R7 260 aaPredicted RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 PNPLA1Q8N8W4 532 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 NECAB1Q8N987 351 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 STKLD1Q8NE28 680 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 MDM1Q8TC05 714 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 ADAM32Q8TC27 787 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SH3RF2Q8TEC5 729 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SNX29Q8TEQ0 813 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 BICD1Q96G01 975 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SLC22A12Q96S37 553 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 PYM1Q9BRP8 204 aaKnown RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 PI4K2AQ9BTU6 479 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 CAPN10Q9HC96 672 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 DNAAF2Q9NVR5 837 aaKnown RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 APOBEC2Q9Y235 224 aaKnown RBP8.2□□□□□ -1.1
CCDC47-205ENST00000582331 RAXQ9Y2V3 346 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 DENND4CQ5VZ89 1909 aa8.2□□□□□ -1.1
CCDC47-205ENST00000582331 SGK1O00141 431 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TADA3O75528 432 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 NOL4O94818 638 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TCF3P15923 654 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 HDCP19113 662 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 FECHP22830 423 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 GUCY2CP25092 1073 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TAF6P49848 677 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 LIG4P49917 911 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TSPY1Q01534 308 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 RPL6Q02878 288 aaKnown RBP8.19□□□□□ -1.1
CCDC47-205ENST00000582331 ZNF33AQ06730 810 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TMEM132DQ14C87 1099 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 ANKRD1Q15327 319 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 DDR2Q16832 855 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 ZC2HC1CQ53FD0 456 aaPredicted RBP8.19□□□□□ -1.1
CCDC47-205ENST00000582331 EMC10Q5UCC4 262 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 SDHAF4Q5VUM1 108 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 WSCD1Q658N2 575 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 FSIP1Q8NA03 581 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 IL17RCQ8NAC3 791 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 OR2I1PQ8NGU4 316 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 LRRC15Q8TF66 581 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 HMGB4Q8WW32 186 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TRMT2BQ96GJ1 504 aaKnown RBP8.19□□□□□ -1.1
CCDC47-205ENST00000582331 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 PNKPQ96T60 521 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 RAB34Q9BZG1 259 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 ASH1LQ9NR48 2969 aaKnown RBP8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TMLHEQ9NVH6 421 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 CACNA2D2Q9NY47 1150 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 GCNT4Q9P109 453 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 DERAQ9Y315 318 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TNRC6BQ9UPQ9 1833 aaKnown RBP8.19□□□□□ -1.1
CCDC47-205ENST00000582331 SMG1Q96Q15 3661 aaKnown RBP8.19□□□□□ -1.1
CCDC47-205ENST00000582331 BPTFQ12830 3046 aa8.19□□□□□ -1.1
CCDC47-205ENST00000582331 TCRBV21S2A2A0A5A6 115 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 C2orf78A6NCI8 922 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 H0YCG3 227 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 FAM189A1O60320 539 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 KAT7O95251 611 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 APODP05090 189 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 NFICP08651 508 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 CDC25AP30304 524 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 TNFRSF4P43489 277 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 SLC6A11P48066 632 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 PDE6CP51160 858 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 GUCY1B3Q02153 619 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 RAD51AP2Q09MP3 1159 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 KCNB1Q14721 858 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 GAB4Q2WGN9 574 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 TTC38Q5R3I4 469 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 KRT79Q5XKE5 535 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 TOGARAM2Q6ZUX3 1019 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 NAXDQ8IW45 347 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms