RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 ADGRD2Q7Z7M1 963 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 TMEM110Q86TL2 294 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 KREMEN2Q8NCW0 462 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 SECISBP2LQ93073 1101 aaKnown RBP12.16□□□□□ -0.46
GGA3-211ENST00000582232 KCNK16Q96T55 309 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 SLC4A5Q9BY07 1137 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 RHOBTB2Q9BYZ6 727 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 ISCUQ9H1K1 167 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 DEF6Q9H4E7 631 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 TLE6Q9H808 572 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 CYP4F11Q9HBI6 524 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 IL37Q9NZH6 218 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 NAGPAQ9UK23 515 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 MTCH2Q9Y6C9 303 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 EPN1Q9Y6I3 576 aaPredicted RBP12.16□□□□□ -0.46
GGA3-211ENST00000582232 ZNF638Q14966 1978 aaKnown RBP12.16□□□□□ -0.46
GGA3-211ENST00000582232 SOWAHDA6NJG2 315 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 EIF3CLB5ME19 914 aaKnown RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 F8VP50 259 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 TNFRSF10BO14763 440 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 ARHGAP6O43182 974 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 NRDCO43847 1150 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 AKR1B10O60218 316 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 RTN2O75298 545 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 POU2F2P09086 479 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 HOXA9P31269 272 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 SSTR3P32745 418 aaPredicted RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 CYLC1P35663 651 aaPredicted RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 GRIK1P39086 918 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 ACADSBP45954 432 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 GABRB2P47870 512 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 SNX16P57768 344 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 CCZ1BP86790 482 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 CCZ1P86791 482 aaPredicted RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 PLD1Q13393 1074 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 MGAT5BQ3V5L5 792 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 C10orf76Q5T2E6 689 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 ACAD10Q6JQN1 1059 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 PMF1Q6P1K2 205 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 ALKBH5Q6P6C2 394 aaKnown RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 ELMSAN1Q6PJG2 1045 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 PIGZQ86VD9 579 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 PHF13Q86YI8 300 aaPredicted RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 PASD1Q8IV76 773 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 SCML4Q8N228 414 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 TTC9BQ8N6N2 239 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 C1orf131Q8NDD1 294 aaKnown RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 VCPIP1Q96JH7 1222 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 NOX5Q96PH1 765 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 EIF3CQ99613 913 aaKnown RBP12.15□□□□□ -0.46
GGA3-211ENST00000582232 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.15□□□□□ -0.46
GGA3-211ENST00000582232 COMMD8Q9NX08 183 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 SLC27A5Q9Y2P5 690 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 YIPF1Q9Y548 306 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 INSL5Q9Y5Q6 135 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 HCFC2Q9Y5Z7 792 aa12.15□□□□□ -0.46
GGA3-211ENST00000582232 FAM92AA1XBS5 289 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 TULP2O00295 520 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 PRRG1O14668 218 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 PER2O15055 1255 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 NCK2O43639 380 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 CSPG5O95196 566 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 NDUFA10O95299 355 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 HNRNPA1P09651 372 aaKnown RBP eCLIP12.14□□□□□ -0.47
GGA3-211ENST00000582232 EPCAMP16422 314 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 ATF6P18850 670 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 MMP8P22894 467 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 NSFP46459 744 aaKnown RBP12.14□□□□□ -0.47
GGA3-211ENST00000582232 ALDH1A3P47895 512 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 NRIP1P48552 1158 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 GSCP56915 257 aaPredicted RBP12.14□□□□□ -0.47
GGA3-211ENST00000582232 GFPT1Q06210 699 aaPredicted RBP12.14□□□□□ -0.47
GGA3-211ENST00000582232 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
GGA3-211ENST00000582232 PDCLQ13371 301 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 ADGRE1Q14246 886 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 COL19A1Q14993 1142 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 DDR2Q16832 855 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 LIN9Q5TKA1 542 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 NAA35Q5VZE5 725 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 RAD9BQ6WBX8 426 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 MON1BQ7L1V2 547 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 RBM23Q86U06 439 aaKnown RBP12.14□□□□□ -0.47
GGA3-211ENST00000582232 SCN4BQ8IWT1 228 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 EFHBQ8N7U6 833 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 MSANTD4Q8NCY6 345 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 PPP1R13BQ96KQ4 1090 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 CPXM1Q96SM3 734 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 SEPT5Q99719 369 aaPredicted RBP12.14□□□□□ -0.47
GGA3-211ENST00000582232 MIS12Q9H081 205 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 SEPT11Q9NVA2 429 aaKnown RBP12.14□□□□□ -0.47
GGA3-211ENST00000582232 ASB3Q9Y575 518 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 USP3Q9Y6I4 520 aa12.14□□□□□ -0.47
GGA3-211ENST00000582232 ZNF263O14978 683 aa12.13□□□□□ -0.47
GGA3-211ENST00000582232 ZMYND10O75800 440 aa12.13□□□□□ -0.47
GGA3-211ENST00000582232 GABBR2O75899 941 aa12.13□□□□□ -0.47
GGA3-211ENST00000582232 RTN3O95197 1032 aaPredicted RBP12.13□□□□□ -0.47
GGA3-211ENST00000582232 FTLP02792 175 aaPredicted RBP12.13□□□□□ -0.47
GGA3-211ENST00000582232 CALB1P05937 261 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms