RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 CKMP06732 381 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 KCNB1Q14721 858 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 PON2Q15165 354 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 ZNF77Q15935 545 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 ZACNQ401N2 412 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 WDR44Q5JSH3 913 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 CHAMP1Q96JM3 812 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 TRPC7Q9HCX4 862 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 TRPM5Q9NZQ8 1165 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 ARHGAP26Q9UNA1 814 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 FRMD4BQ9Y2L6 1034 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 SPTBN4Q9H254 2564 aa23.81■■□□□ 1.4
CASC3-207ENST00000581849 F8VP50 259 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 P4HA1P13674 534 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 SGSM1Q2NKQ1 1148 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 GUF1Q8N442 669 aaKnown RBP23.8■■□□□ 1.4
CASC3-207ENST00000581849 TTC8Q8TAM2 541 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 RIN3Q8TB24 985 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 EXOC4Q96A65 974 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 TNIP3Q96KP6 325 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 DPEP3Q9H4B8 488 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 EBF3Q9H4W6 596 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 HELZP42694 1942 aaKnown RBP23.8■■□□□ 1.4
CASC3-207ENST00000581849 ATP8B3O60423 1300 aa23.8■■□□□ 1.4
CASC3-207ENST00000581849 GPR179Q6PRD1 2367 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 TRDMT1O14717 391 aaKnown RBP23.79■■□□□ 1.4
CASC3-207ENST00000581849 PRR29P0C7W0 189 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 HDCP19113 662 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 HOXA6P31267 233 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 SATB1Q01826 763 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 TMEM196Q5HYL7 178 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 CPA6Q8N4T0 437 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 OSCP1Q8WVF1 389 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 SLC22A12Q96S37 553 aa23.79■■□□□ 1.4
CASC3-207ENST00000581849 RBM12Q9NTZ6 932 aaKnown RBP23.79■■□□□ 1.4
CASC3-207ENST00000581849 VNN1O95497 513 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 USP46P62068 366 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 GRSF1Q12849 480 aaKnown RBP eCLIP23.78■■□□□ 1.4
CASC3-207ENST00000581849 CEP135Q66GS9 1140 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 INTS8Q75QN2 995 aaKnown RBP23.78■■□□□ 1.4
CASC3-207ENST00000581849 ARL14EPQ8N8R7 260 aaPredicted RBP23.78■■□□□ 1.4
CASC3-207ENST00000581849 ATP2A3Q93084 1043 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 CYP2S1Q96SQ9 504 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 B3GNT5Q9BYG0 378 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 ZNF518BQ9C0D4 1074 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 SMYD3Q9H7B4 428 aa23.78■■□□□ 1.4
CASC3-207ENST00000581849 SMG5Q9UPR3 1016 aaKnown RBP23.78■■□□□ 1.4
CASC3-207ENST00000581849 WDR87Q6ZQQ6 2873 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 C2orf78A6NCI8 922 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 ZNF840PA6NDX5 716 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 ZNF202O95125 648 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 OLFM2O95897 454 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 RPL13P26373 211 aaKnown RBP23.77■■□□□ 1.4
CASC3-207ENST00000581849 CNR2P34972 360 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 IFNAR2P48551 515 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 DLG4P78352 724 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 SLC7A9P82251 487 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 TRIM68Q6AZZ1 485 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 Q6ZS52 159 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 SV2AQ7L0J3 742 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 GPR161Q8N6U8 529 aaKnown RBP23.77■■□□□ 1.4
CASC3-207ENST00000581849 OVCA2Q8WZ82 227 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 SECISBP2LQ93073 1101 aaKnown RBP23.77■■□□□ 1.4
CASC3-207ENST00000581849 CHFRQ96EP1 664 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 SLITRK1Q96PX8 696 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 HINFPQ9BQA5 517 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 GOLPH3LQ9H4A5 285 aa23.77■■□□□ 1.4
CASC3-207ENST00000581849 DUS2Q9NX74 493 aaKnown RBP23.77■■□□□ 1.4
CASC3-207ENST00000581849 OTOL1A6NHN0 477 aaPredicted RBP23.76■■□□□ 1.39
CASC3-207ENST00000581849 RTN3O95197 1032 aaPredicted RBP23.76■■□□□ 1.39
CASC3-207ENST00000581849 ASS1P00966 412 aaKnown RBP23.76■■□□□ 1.39
CASC3-207ENST00000581849 ARSAP15289 507 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 NR2F2P24468 414 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 VAMP7P51809 220 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 BECN1Q14457 450 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 UNC93AQ86WB7 457 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 NUP93Q8N1F7 819 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 PDZD8Q8NEN9 1154 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 SH3RF2Q8TEC5 729 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 ECT2Q9H8V3 914 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 NCDNQ9UBB6 729 aa23.76■■□□□ 1.39
CASC3-207ENST00000581849 K7ESF4 209 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 ATG13O75143 517 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 DRD1P21728 446 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 GJA4P35212 333 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 CDH8P55286 799 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 MCCD1P59942 119 aaPredicted RBP23.75■■□□□ 1.39
CASC3-207ENST00000581849 EML3Q32P44 896 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 FBXO43Q4G163 708 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 C1orf220Q5T0J3 134 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 FSTL4Q6MZW2 842 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 FAM35AQ86V20 835 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 SMARCD1Q96GM5 515 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 SDCBP2Q9H190 292 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 TMEM30AQ9NV96 361 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 COMMD8Q9NX08 183 aa23.75■■□□□ 1.39
CASC3-207ENST00000581849 CLSTN1O94985 981 aa23.74■■□□□ 1.39
CASC3-207ENST00000581849 OAS1P00973 400 aaKnown RBP23.74■■□□□ 1.39
CASC3-207ENST00000581849 CACNA2D1P54289 1103 aa23.74■■□□□ 1.39
CASC3-207ENST00000581849 TAF10Q12962 218 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms