RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 PANK4Q9NVE7 773 aa10.99□□□□□ -0.65
GGA3-210ENST00000580799 MMP17Q9ULZ9 603 aa10.99□□□□□ -0.65
GGA3-210ENST00000580799 MORC2Q9Y6X9 1032 aaPredicted RBP10.99□□□□□ -0.65
GGA3-210ENST00000580799 PTPRDP23468 1912 aa10.99□□□□□ -0.65
GGA3-210ENST00000580799 CEP295Q9C0D2 2601 aa10.99□□□□□ -0.65
GGA3-210ENST00000580799 CHD6Q8TD26 2715 aa10.99□□□□□ -0.65
GGA3-210ENST00000580799 ATG2BQ96BY7 2078 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 C4orf47A7E2U8 309 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 K7EQS6 105 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 LEFTY2O00292 366 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 TRIM66O15016 1216 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 KHNYNO15037 678 aaKnown RBP10.98□□□□□ -0.65
GGA3-210ENST00000580799 HCRTO43612 131 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 WARSP23381 471 aaKnown RBP10.98□□□□□ -0.65
GGA3-210ENST00000580799 BDNFP23560 247 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 LMO2P25791 158 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 GRIK1P39086 918 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 NOVA1P51513 510 aaKnown RBP10.98□□□□□ -0.65
GGA3-210ENST00000580799 PSMC1P62191 440 aaKnown RBP10.98□□□□□ -0.65
GGA3-210ENST00000580799 SLC7A9P82251 487 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 HSF5Q4G112 596 aaPredicted RBP10.98□□□□□ -0.65
GGA3-210ENST00000580799 C2orf27AQ580R0 203 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 ANO7Q6IWH7 933 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 WDR49Q8IV35 697 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 CCDC65Q8IXS2 484 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 MYCBPAPQ8TBZ2 947 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 MYLPFQ96A32 169 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 PCED1BQ96HM7 432 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 FAM84AQ96KN4 292 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 C8orf48Q96LL4 319 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 CLIC6Q96NY7 704 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 PCIF1Q9H4Z3 704 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 TMEM9BQ9NQ34 198 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 CRTAC1Q9NQ79 661 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 PTPRJQ12913 1337 aa10.98□□□□□ -0.65
GGA3-210ENST00000580799 CNOT1A5YKK6 2376 aaKnown RBP10.98□□□□□ -0.65
GGA3-210ENST00000580799 NUP205Q92621 2012 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 ZFHX4Q86UP3 3567 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 ZNF840PA6NDX5 716 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 TACC1O75410 805 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 ALDH1A2O94788 518 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 PRPF6O94906 941 aaKnown RBP10.97□□□□□ -0.65
GGA3-210ENST00000580799 OLFM2O95897 454 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 ADH1CP00326 375 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 CYP17A1P05093 508 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 PROS1P07225 676 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 FAM163BP0C2L3 166 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 CSRP1P21291 193 aaKnown RBP10.97□□□□□ -0.65
GGA3-210ENST00000580799 USP46P62068 366 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 CYP27A1Q02318 531 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 CRY1Q16526 586 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 GAB4Q2WGN9 574 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 LMBRD2Q68DH5 695 aaPredicted RBP10.97□□□□□ -0.65
GGA3-210ENST00000580799 SCARA3Q6AZY7 606 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 CYP2U1Q7Z449 544 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 FILIP1Q7Z7B0 1213 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 DDX42Q86XP3 938 aaKnown RBP eCLIP10.97□□□□□ -0.65
GGA3-210ENST00000580799 ADGRG2Q8IZP9 1017 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 OR5B17Q8NGF7 314 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 OLIG1Q8TAK6 271 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 SLITRK1Q96PX8 696 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 PNKPQ96T60 521 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 MMS19Q96T76 1030 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 FGFBP2Q9BYJ0 223 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 LRRC27Q9C0I9 530 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 ELOVL4Q9GZR5 314 aa10.97□□□□□ -0.65
GGA3-210ENST00000580799 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.96□□□□□ -0.65
GGA3-210ENST00000580799 F8VP50 259 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 EIF3DO15371 548 aaKnown RBP eCLIP10.96□□□□□ -0.65
GGA3-210ENST00000580799 OAS1P00973 400 aaKnown RBP10.96□□□□□ -0.65
GGA3-210ENST00000580799 PDGFRBP09619 1106 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 CEACAM1P13688 526 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 DPP6P42658 865 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 SEC13P55735 322 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 ZXDBP98169 803 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 RESTQ13127 1097 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 CUL4AQ13619 759 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 BYSLQ13895 437 aaKnown RBP10.96□□□□□ -0.65
GGA3-210ENST00000580799 SLC39A14Q15043 492 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 SPDYCQ5MJ68 293 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 TDRD10Q5VZ19 366 aaKnown RBP10.96□□□□□ -0.65
GGA3-210ENST00000580799 TRAPPC11Q7Z392 1133 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 CBWD2Q8IUF1 395 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 CCDC33Q8N5R6 958 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 MDGA1Q8NFP4 955 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 WHAMMQ8TF30 809 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 OTUB2Q96DC9 234 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 SPACA7Q96KW9 195 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 RNF38Q9H0F5 515 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 TNMDQ9H2S6 317 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 SNX25Q9H3E2 840 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.65
GGA3-210ENST00000580799 HSPBP1Q9NZL4 362 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 TBC1D14Q9P2M4 693 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 EVLQ9UI08 416 aaPredicted RBP10.96□□□□□ -0.65
GGA3-210ENST00000580799 INVSQ9Y283 1065 aa10.96□□□□□ -0.65
GGA3-210ENST00000580799 THADAQ6YHU6 1953 aa10.96□□□□□ -0.66
GGA3-210ENST00000580799 PLXND1Q9Y4D7 1925 aa10.96□□□□□ -0.66
GGA3-210ENST00000580799 TNRC6BQ9UPQ9 1833 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms