RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 RSPH10BP0C881 870 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 ZNF286BP0CG31 522 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 ATP5JP18859 108 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 CALML3P27482 149 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 HOXC8P31273 242 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 ICAM3P32942 547 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 CTNNB1P35222 781 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 NOVP48745 357 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 RPS6P62753 249 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 TFAP4Q01664 338 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 IKQ13123 557 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 ZNF460Q14592 562 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 PIK3R6Q5UE93 754 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 GIMAP6Q6P9H5 292 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 BTNL9Q6UXG8 535 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 Q6ZUG5 572 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 RALYLQ86SE5 291 aaKnown RBP7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 SERINC5Q86VE9 423 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 C7orf31Q8N865 590 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 CHST14Q8NCH0 376 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 VN1R2Q8NFZ6 395 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 SPPL3Q8TCT6 385 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 SUSD6Q92537 303 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 DLG3Q92796 817 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 ZNF689Q96CS4 500 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 MBD6Q96DN6 1003 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 RPGRIP1Q96KN7 1286 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 GBP4Q96PP9 640 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 PHF7Q9BWX1 381 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 SMOC2Q9H3U7 446 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 UCKL1Q9NWZ5 548 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 COL20A1Q9P218 1284 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 MAGEC2Q9UBF1 373 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 ADAM29Q9UKF5 820 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 BARX2Q9UMQ3 279 aaPredicted RBP7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 B3GALT1Q9Y5Z6 326 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 RAD50Q92878 1312 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 OTOGLQ3ZCN5 2332 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 ZZEF1O43149 2961 aa7.41□□□□□ -1.22
PPP4R1-216ENST00000580283 FRYQ5TBA9 3013 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 K7ESM1 405 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 F2P00734 622 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 PLATP00750 562 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 GH1P01241 217 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 MMP1P03956 469 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 ITGB1P05556 798 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 JMJD7P0C870 316 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 SDSP20132 328 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 CASTP20810 708 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 THPOP40225 353 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 PTPN21Q16825 1174 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 FSTL4Q6MZW2 842 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 RNF207Q6ZRF8 634 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 ARHGEF18Q6ZSZ5 1173 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 SEPT14Q6ZU15 432 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 ERC1Q8IUD2 1116 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 REXO1L1PQ8IX06 675 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 EFHBQ8N7U6 833 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 DNERQ8NFT8 737 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 IL17RAQ96F46 866 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 TAAR1Q96RJ0 339 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 IFIH1Q9BYX4 1025 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 LMAN2LQ9H0V9 348 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 S1PR5Q9H228 398 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 JADE2Q9NQC1 790 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 MRPL42Q9Y6G3 142 aaKnown RBP7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 EMSYQ7Z589 1322 aa7.4□□□□□ -1.22
PPP4R1-216ENST00000580283 ENPP3O14638 875 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 LAMTOR5O43504 91 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 CDC45O75419 566 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 TSPY3P0CV98 308 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 TSPY8P0CW00 308 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 SDHAP31040 664 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 NRIP1P48552 1158 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 NDUFV1P49821 464 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 KCNC3Q14003 757 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 DGKDQ16760 1214 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 C21orf62-AS1Q17RA5 79 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 SKOR2Q2VWA4 1001 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 TM4SF20Q53R12 229 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 RBM23Q86U06 439 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 RTN4RL1Q86UN2 441 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 ATP8B4Q8TF62 1192 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 ASB15Q8WXK1 588 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 ERCC4Q92889 916 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 NKD2Q969F2 451 aaPredicted RBP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 C16orf70Q9BSU1 422 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 BTBD2Q9BX70 525 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 RNPEPQ9H4A4 650 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 INTS7Q9NVH2 962 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 CDH22Q9UJ99 828 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 ISY1Q9ULR0 285 aaKnown RBP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 ASB1Q9Y576 335 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 ASPMQ8IZT6 3477 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 CACNA1IQ9P0X4 2223 aa7.39□□□□□ -1.23
PPP4R1-216ENST00000580283 ADGRA3Q8IWK6 1321 aa7.38□□□□□ -1.23
PPP4R1-216ENST00000580283 PER2O15055 1255 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms