RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, human

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-213	ENST00000579838	BCCIP	Q9P287	314 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	CTNNAL1	Q9UBT7	734 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	ASIC3	Q9UHC3	531 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	PCSK1N	Q9UHG2	260 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	SLC12A6	Q9UHW9	1150 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	PIN4	Q9Y237	131 aa	Known RBP	4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	DERA	Q9Y315	318 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	MFHAS1	Q9Y4C4	1052 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	IPP	Q9Y573	584 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	SNX9	Q9Y5X1	595 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	NRCAM	Q92823	1304 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	PLXNA3	P51805	1871 aa		4.87	□□□□□ -1.63
NUP85-213	ENST00000579838	TANC1	Q9C0D5	1861 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ANKRD65	E5RJM6	399 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CLDN5	O00501	218 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	DPYSL4	O14531	572 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	DNALI1	O14645	258 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	TNPO2	O14787	897 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	MGEA5	O60502	916 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ADAMTS4	O75173	837 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	BEST1	O76090	585 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ENDOD1	O94919	500 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ACSL3	O95573	720 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PGK1	P00558	417 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CHRNA1	P02708	482 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	AMH	P03971	560 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	HMGCR	P04035	888 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PDGFRB	P09619	1106 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CTSH	P09668	335 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	KCNE1	P15382	129 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	IL4R	P24394	825 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ACAT1	P24752	427 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ADORA2B	P29275	332 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CCND3	P30281	292 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	MDH1	P40925	334 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	SLCO1A2	P46721	670 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CRYBB1	P53674	252 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	SEC24C	P53992	1094 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CACNA2D1	P54289	1103 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	VCP	P55072	806 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	GJA9	P57773	515 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	MAGOH	P61326	146 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PITX1	P78337	314 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	MRPS6	P82932	125 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	TAP1	Q03518	808 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	AUH	Q13825	339 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	DPYSL3	Q14195	570 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PIGH	Q14442	188 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PTGIS	Q16647	500 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ZSCAN26	Q16670	478 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	KYNU	Q16719	465 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	QPCT	Q16769	361 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	KYAT1	Q16773	422 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CDO1	Q16878	200 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	LONRF1	Q17RB8	773 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	P3H1	Q32P28	736 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	NBPF20	Q3BBV1	942 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	KRT71	Q3SY84	523 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	MSS51	Q4VC12	460 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CCDC38	Q502W7	563 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	LRRC38	Q5VT99	294 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ARHGAP17	Q68EM7	881 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PPP1R2P3	Q6NXS1	205 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	NOTUM	Q6P988	496 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CXCL17	Q6UXB2	119 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	CD300LG	Q6UXG3	332 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PAQR9	Q6ZVX9	377 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	SYDE1	Q6ZW31	735 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	BBS12	Q6ZW61	710 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	NT5DC4	Q86YG4	428 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	TAB3	Q8N5C8	712 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PQLC3	Q8N755	202 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	C3orf58	Q8NDZ4	430 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	GSTCD	Q8NEC7	633 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	BEST2	Q8NFU1	509 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ATL2	Q8NHH9	583 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	SLC35F5	Q8WV83	523 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	MAIP1	Q8WWC4	291 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PRCC	Q92733	491 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	FAXDC2	Q96IV6	333 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	RBM41	Q96IZ5	413 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	C9orf72	Q96LT7	481 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	ZFP42	Q96MM3	310 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	RUNDC3B	Q96NL0	473 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PPP1R10	Q96QC0	940 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PAAF1	Q9BRP4	392 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	C11orf84	Q9BUA3	381 aa	Predicted RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	SNRNP25	Q9BV90	132 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	NT5C1A	Q9BXI3	368 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	MIS12	Q9H081	205 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	AP5M1	Q9H0R1	490 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	AGO3	Q9H9G7	860 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	PLEKHA5	Q9HAU0	1116 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	TMPRSS4	Q9NRS4	437 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	TMEM30A	Q9NV96	361 aa		4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	DDX56	Q9NY93	547 aa	Known RBP	4.86	□□□□□ -1.63
NUP85-213	ENST00000579838	EURL	Q9NYK6	297 aa		4.86	□□□□□ -1.63

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