RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 PTPRJQ12913 1337 aa20.53■□□□□ 0.88
CDKN2A-213ENST00000579122 ZNF233A6NK53 670 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 WARSP23381 471 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 BDNFP23560 247 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 GRIK1P39086 918 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 ANP32AP39687 249 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 PSMC1P62191 440 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 RESTQ13127 1097 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 DUOXA2Q1HG44 320 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 USP39Q53GS9 565 aaKnown RBP20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 DENND5BQ6ZUT9 1274 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 USP33Q8TEY7 942 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 EDEM2Q9BV94 578 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 TTLL2Q9BWV7 592 aa20.52■□□□□ 0.88
CDKN2A-213ENST00000579122 CHD6Q8TD26 2715 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 K7EQS6 105 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 LEFTY2O00292 366 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 ANXA13P27216 316 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 GBP1P32455 592 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 OPRD1P41143 372 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 PPP3CCP48454 512 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 ZXDBP98169 803 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 CEBPZQ03701 1054 aaKnown RBP20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 STXBP4Q6ZWJ1 553 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 RASSF3Q86WH2 238 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 CCDC65Q8IXS2 484 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 MYCBPAPQ8TBZ2 947 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 PANK2Q9BZ23 570 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 MYO16Q9Y6X6 1858 aa20.51■□□□□ 0.87
CDKN2A-213ENST00000579122 A0A087X0B3 334 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 TRIM66O15016 1216 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 PDGFRBP09619 1106 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 USP46P62068 366 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 NOP14P78316 857 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 SLC7A9P82251 487 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 CYP27A1Q02318 531 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 GAB4Q2WGN9 574 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 PMS2CLQ68D20 193 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 FAM173BQ6P4H8 233 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 CBWD2Q8IUF1 395 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 WDR49Q8IV35 697 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 PCED1BQ96HM7 432 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 CNOT6LQ96LI5 555 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 KIAA1586Q9HCI6 787 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 MMP17Q9ULZ9 603 aa20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 HELZP42694 1942 aaKnown RBP20.5■□□□□ 0.87
CDKN2A-213ENST00000579122 FRYQ5TBA9 3013 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 ZNF840PA6NDX5 716 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 SEC13P55735 322 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 SLC39A14Q15043 492 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 C2orf27AQ580R0 203 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 PSAPL1Q6NUJ1 521 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 ADGRG2Q8IZP9 1017 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 C8orf48Q96LL4 319 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 MMS19Q96T76 1030 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 TPSD1Q9BZJ3 242 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 HSPBP1Q9NZL4 362 aa20.49■□□□□ 0.87
CDKN2A-213ENST00000579122 C4orf47A7E2U8 309 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 SLC9A3R1O14745 358 aaPredicted RBP20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 TACC1O75410 805 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 OLFM2O95897 454 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 CYP17A1P05093 508 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 FAM163BP0C2L3 166 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 SYT1P21579 422 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 MRPS21P82921 87 aaKnown RBP20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 CRY1Q16526 586 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 DAB2IPQ5VWQ8 1189 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 ANO7Q6IWH7 933 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 TRAPPC11Q7Z392 1133 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 FILIP1Q7Z7B0 1213 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 GLIS3Q8NEA6 775 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 LRRC27Q9C0I9 530 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 RNF38Q9H0F5 515 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 TNMDQ9H2S6 317 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 SNX25Q9H3E2 840 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 INVSQ9Y283 1065 aa20.48■□□□□ 0.87
CDKN2A-213ENST00000579122 LNP1A1A4G5 178 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 F8VP50 259 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 KHNYNO15037 678 aaKnown RBP20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 GNL1P36915 607 aaPredicted RBP20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 PDILTQ8N807 584 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 SNX21Q969T3 373 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 USP28Q96RU2 1077 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 MRPL45Q9BRJ2 306 aaKnown RBP20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 CPQQ9Y646 472 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 ASPMQ8IZT6 3477 aa20.47■□□□□ 0.87
CDKN2A-213ENST00000579122 EIF3DO15371 548 aaKnown RBP eCLIP20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 ALDH1A2O94788 518 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 OAS1P00973 400 aaKnown RBP20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 HOXD13P35453 343 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 EIF2DP41214 584 aaKnown RBP20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 NOVA1P51513 510 aaKnown RBP20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 DHCR24Q15392 516 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 HSF5Q4G112 596 aaPredicted RBP20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 TDRD10Q5VZ19 366 aaKnown RBP20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 HS2ST1Q7LGA3 356 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 CYP2U1Q7Z449 544 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 CCDC33Q8N5R6 958 aa20.46■□□□□ 0.87
CDKN2A-213ENST00000579122 MDGA1Q8NFP4 955 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms