RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MED10Q9BTT4 135 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SMYD3Q9H7B4 428 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ECT2Q9H8V3 914 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PARD6AQ9NPB6 346 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 EHD2Q9NZN4 543 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CGNQ9P2M7 1197 aaKnown RBP9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NME7Q9Y5B8 376 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DCHS1Q96JQ0 3298 aa9.82□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FAM186AA6NE01 2351 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KIF26AQ9ULI4 1882 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MED19A0JLT2 244 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 LRRIQ3A6PVS8 624 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CLDN5O00501 218 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TRDMT1O14717 391 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SCAMP3O14828 347 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ACTN4O43707 911 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ATG13O75143 517 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PAPSS2O95340 614 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RETP07949 1114 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SLFN14P0C7P3 912 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CCDC192P0DO97 292 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PFKFB1P16118 471 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DRD1P21728 446 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ATICP31939 592 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CNR2P34972 360 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PDE6CP51160 858 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CACNA2D1P54289 1103 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CDH8P55286 799 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 STK4Q13043 487 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NR1H3Q13133 447 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TDRD10Q5VZ19 366 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CEP135Q66GS9 1140 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 LIMS2Q7Z4I7 341 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 WDR5BQ86VZ2 330 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 C12orf56Q8IXR9 622 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 B3GALNT2Q8NCR0 500 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KIAA0895Q8NCT3 520 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RPLP0P6Q8NHW5 317 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CD101Q93033 1021 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SPATA32Q96LK8 384 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 HHIPQ96QV1 700 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF518BQ9C0D4 1074 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ELOVL4Q9GZR5 314 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 LINC00597Q9H2U6 94 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FBRSL1Q9HCM7 1045 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 POLR3BQ9NW08 1133 aaPredicted RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SMPD4Q9NXE4 827 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DLL3Q9NYJ7 618 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GCNT4Q9P109 453 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ARHGAP26Q9UNA1 814 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RIF1Q5UIP0 2472 aaKnown RBP9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 OBSL1O75147 1896 aa9.81□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GVINP1Q7Z2Y8 2422 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PRR5-ARHGAP8B1AHC4 643 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 LEFTY2O00292 366 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KLRC4O43908 158 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NFATC1O95644 943 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SDHBP21912 280 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KCNA4P22459 653 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SEC13P55735 322 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NOP14P78316 857 aaKnown RBP9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DLG4P78352 724 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 KRT85P78386 507 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ARHGAP8P85298 464 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 TAF10Q12962 218 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NCOA4Q13772 614 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 EML3Q32P44 896 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF667Q5HYK9 610 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 FAM160A2Q8N612 972 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PLEKHO2Q8TD55 490 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PARD3BQ8TEW8 1205 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CHAMP1Q96JM3 812 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 C8orf48Q96LL4 319 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SLITRK1Q96PX8 696 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 B3GNT5Q9BYG0 378 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 GZF1Q9H116 711 aaPredicted RBP9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 XYLT2Q9H1B5 865 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SEMA4GQ9NTN9 838 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RCOR1Q9UKL0 485 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CPQQ9Y646 472 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 DMXL1Q9Y485 3027 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ATP8B3O60423 1300 aa9.8□□□□□ -0.84
CDK5RAP3-211ENST00000578996 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 ZNF840PA6NDX5 716 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 AXIN1O15169 862 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 CALUO43852 315 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RPP40O75818 363 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 STAU1O95793 577 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 NR3C1P04150 777 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 RPN1P04843 607 aaKnown RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PRR29P0C7W0 189 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 MBL2P11226 248 aaPredicted RBP9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 P4HA1P13674 534 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 YWHAQP27348 245 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PIK3CAP42336 1068 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 SYKP43405 635 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 PPP3CCP48454 512 aa9.79□□□□□ -0.84
CDK5RAP3-211ENST00000578996 AP3M2P53677 418 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms