RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 HAUS4Q9H6D7 363 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 TSPAN16Q9UKR8 245 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
TRAPPC8-204ENST00000578252 MTCL1Q9Y4B5 1905 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 PATJQ8NI35 1801 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 HIDE1A8MVS5 230 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 TRIM66O15016 1216 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 ADAM12O43184 909 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 AP1G2O75843 785 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 MICAL2O94851 1124 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 GLUD1P00367 558 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 NPR3P17342 541 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 TNFAIP3P21580 790 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 ADORA2BP29275 332 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 ELF1P32519 619 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 IRS1P35568 1242 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 SNX16P57768 344 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 RPL10AP62906 217 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 GOLGA8FQ08AF8 430 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 GOLGA8DPQ0D2H9 430 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 RNF19BQ6ZMZ0 732 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 CCDC149Q6ZUS6 474 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 SCUBE3Q8IX30 993 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 CCDC170Q8IYT3 715 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 TMEM35BQ8NCS4 154 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 MSANTD4Q8NCY6 345 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 SLC20A1Q8WUM9 679 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 CCDC42Q96M95 316 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 NOX5Q96PH1 765 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 BAG1Q99933 345 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 SYT11Q9BT88 431 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 DUSP16Q9BY84 665 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 UBXN6Q9BZV1 441 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 TTYH1Q9H313 450 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 DEF6Q9H4E7 631 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 NSUN3Q9H649 340 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 CSNK1G1Q9HCP0 422 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 PNPLA8Q9NP80 782 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 DMAP1Q9NPF5 467 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 ACP6Q9NPH0 428 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 TMLHEQ9NVH6 421 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 ABI2Q9NYB9 513 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 CHD7Q9P2D1 2997 aa11.84□□□□□ -0.51
TRAPPC8-204ENST00000578252 RNF223E7ERA6 249 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 M0QYV0 167 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 XPO1O14980 1071 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 ADH1BP00325 375 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 MMEP08473 750 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 HAPLN1P10915 354 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 SKILP12757 684 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 CHRNB2P17787 502 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 POU3F3P20264 500 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 CDH5P33151 784 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 CYLC1P35663 651 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 GCGRP47871 477 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 CLCN4P51793 760 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 FMO1Q01740 532 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 ADCY1Q08828 1119 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 PLD1Q13393 1074 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 LIN9Q5TKA1 542 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 TAF3Q5VWG9 929 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 LILRA6Q6PI73 481 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 PAQR9Q6ZVX9 377 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 ZNF571Q7Z3V5 609 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 TCEAL8Q8IYN2 117 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 STK32AQ8WU08 396 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 C8orf48Q96LL4 319 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 PGLYRP2Q96PD5 576 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 LPIN3Q9BQK8 851 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 ZSWIM1Q9BR11 485 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 MIS12Q9H081 205 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 PLEKHA4Q9H4M7 779 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 PRDM12Q9H4Q4 367 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 TLE6Q9H808 572 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 NHEJ1Q9H9Q4 299 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 CYLDQ9NQC7 956 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 KRT82Q9NSB4 513 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 SEPT11Q9NVA2 429 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 FBXW11Q9UKB1 542 aa11.83□□□□□ -0.52
TRAPPC8-204ENST00000578252 RFXAPO00287 272 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CLDN5O00501 218 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 PRRG1O14668 218 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 TGM5O43548 720 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 AKR1B10O60218 316 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CLASP2O75122 1294 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CSPG5O95196 566 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 IPO7O95373 1038 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 S1PR4O95977 384 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CALCAP01258 141 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CYP1A1P04798 512 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 SRGAP2BP0DMP2 458 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 GZMAP12544 262 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 BDNFP23560 247 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 CYP2F1P24903 491 aa11.82□□□□□ -0.52
TRAPPC8-204ENST00000578252 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms